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  5. Sam_g00356

Sam_g00356


Description : component *(uS7m) of small mitoribosomal-subunit proteome & original description: none


Gene families : OG0003075 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003075_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g00356

Target Alias Description ECC score Gene Family Method Actions
AT2G07696 No alias Ribosomal protein S7p/S5e family protein 0.08 OrthoFinder output from all 47 species
ATCG00900 RPS7.1, RPS7 Ribosomal protein S7p/S5e family protein 0.08 OrthoFinder output from all 47 species
ATCG01240 RPS7.2 ribosomal protein S7 0.08 OrthoFinder output from all 47 species
ATMG01270 RPS7 mitochondrial ribosomal protein S7 0.08 OrthoFinder output from all 47 species
Aev_g27286 RPS7.1, RPS7 component *(uS7c) of small plastid ribosomal-subunit... 0.1 OrthoFinder output from all 47 species
Ala_g14003 RPS7.1, RPS7 component *(uS7c) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Als_g16999 RPS7.1, RPS7 component *(uS7c) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Aob_g04218 RPS7.1, RPS7 component *(uS7c) of small plastid ribosomal-subunit... 0.1 OrthoFinder output from all 47 species
Aob_g13505 No alias component *(uS7m) of small mitoribosomal-subunit... 0.15 OrthoFinder output from all 47 species
Aop_g15514 No alias component *(uS7m) of small mitoribosomal-subunit... 0.1 OrthoFinder output from all 47 species
Cba_g04878 RPS7.1, RPS7 component *(uS7c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Cba_g25480 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ceric.05G040200.1 RPS7.1, RPS7,... component *(uS7c) of small plastid ribosomal-subunit... 0.02 OrthoFinder output from all 47 species
Ceric.05G043200.1 RPS7.1, RPS7,... component *(uS7c) of small plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Ceric.09G049800.1 RPS7.1, RPS7,... component *(uS7c) of small plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Ceric.18G054300.1 RPS7.1, RPS7,... component *(uS7c) of small plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Ceric.22G078200.1 RPS7.1, RPS7,... component *(uS7c) of small plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Ceric.28G052400.1 RPS7.1, RPS7,... component *(uS7c) of small plastid ribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Ceric.29G003200.1 RPS7.1, RPS7,... component *(uS7c) of small plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Ceric.30G067800.1 RPS7.1, RPS7,... component *(uS7c) of small plastid ribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Ceric.33G038600.1 RPS7.1, RPS7,... component *(uS7c) of small plastid ribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Cre14.g618700 No alias No description available 0.02 OrthoFinder output from all 47 species
Dcu_g21132 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dde_g22546 No alias component *(uS7m) of small mitoribosomal-subunit... 0.03 OrthoFinder output from all 47 species
Gb_04094 No alias Ribosomal protein S7, mitochondrial OS=Marchantia... 0.06 OrthoFinder output from all 47 species
Gb_15254 No alias Ribosomal protein S7, mitochondrial OS=Triticum aestivum... 0.05 OrthoFinder output from all 47 species
Gb_26489 No alias Ribosomal protein S7, mitochondrial OS=Arabidopsis... 0.1 OrthoFinder output from all 47 species
Gb_34448 No alias Ribosomal protein S7, mitochondrial OS=Triticum aestivum... 0.08 OrthoFinder output from all 47 species
Gb_37211 No alias Ribosomal protein S7, mitochondrial OS=Marchantia... 0.11 OrthoFinder output from all 47 species
LOC_Os04g16856.1 RPS7.1, RPS7,... component psRPS7 of small ribosomal subunit proteome 0.08 OrthoFinder output from all 47 species
LOC_Os04g16886.1 RPS7.1, RPS7,... component psRPS7 of small ribosomal subunit proteome 0.08 OrthoFinder output from all 47 species
LOC_Os07g25002.1 RPS7.1, RPS7,... component psRPS7 of small ribosomal subunit proteome 0.08 OrthoFinder output from all 47 species
LOC_Os08g15246.1 RPS7.1, RPS7,... component psRPS7 of small ribosomal subunit proteome 0.08 OrthoFinder output from all 47 species
LOC_Os10g21372.1 RPS7.1, RPS7,... component psRPS7 of small ribosomal subunit proteome 0.08 OrthoFinder output from all 47 species
LOC_Os12g34045.1 LOC_Os12g34045 component mtRPS7 of small ribosomal subunit proteome 0.1 OrthoFinder output from all 47 species
Len_g01016 No alias component *(uS7m) of small mitoribosomal-subunit... 0.04 OrthoFinder output from all 47 species
Lfl_g03137 RPS7.1, RPS7 component *(uS7c) of small plastid ribosomal-subunit... 0.09 OrthoFinder output from all 47 species
Lfl_g06400 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Nbi_g22080 No alias component *(uS7m) of small mitoribosomal-subunit... 0.14 OrthoFinder output from all 47 species
Pir_g04718 No alias component *(uS7m) of small mitoribosomal-subunit... 0.1 OrthoFinder output from all 47 species
Pir_g06433 RPS7.1, RPS7 component *(uS7c) of small plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Sam_g03315 No alias component *(uS7c) of small plastid ribosomal-subunit... 0.06 OrthoFinder output from all 47 species
Spa_g02161 No alias component *(uS7m) of small mitoribosomal-subunit... 0.11 OrthoFinder output from all 47 species
Spa_g19770 RPS7.1, RPS7 component *(uS7c) of small plastid ribosomal-subunit... 0.07 OrthoFinder output from all 47 species
Tin_g12479 No alias component *(uS7m) of small mitoribosomal-subunit... 0.08 OrthoFinder output from all 47 species
Zm00001e039873_P001 RPS7.1, RPS7,... component psRPS7 of small ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
Zm00001e042090_P001 RPS7.1, RPS7,... component psRPS7 of small ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
Zm00001e042267_P001 RPS7.1, RPS7,... component psRPS7 of small ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
Zm00001e042356_P001 RPS7.1, RPS7,... component psRPS7 of small ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species
Zm00001e042499_P001 RPS7.1, RPS7,... component psRPS7 of small ribosomal subunit proteome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003954 NADH dehydrogenase activity IEP HCCA
MF GO:0003955 NAD(P)H dehydrogenase (quinone) activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0008137 NADH dehydrogenase (ubiquinone) activity IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009058 biosynthetic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
MF GO:0015453 oxidoreduction-driven active transmembrane transporter activity IEP HCCA
MF GO:0016409 palmitoyltransferase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP HCCA
BP GO:0022900 electron transport chain IEP HCCA
BP GO:0022904 respiratory electron transport chain IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0042773 ATP synthesis coupled electron transport IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044249 cellular biosynthetic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
MF GO:0050136 NADH dehydrogenase (quinone) activity IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
BP GO:1901576 organic substance biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR023798 Ribosomal_S7_dom 79 216
No external refs found!