Sam_g00455

Description : not classified & original description: none

Gene families : OG0000280 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000280_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g00455
Cluster	HCCA: Cluster_95

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00001p00244170	HCHIB, B-CHI,...	Chitinase 3 OS=Oryza sativa subsp. japonica	0.03	OrthoFinder output from all 47 species
AT2G43570	CHI	chitinase, putative	0.02	OrthoFinder output from all 47 species
AT2G43580	No alias	Chitinase family protein	0.02	OrthoFinder output from all 47 species
AT2G43590	No alias	Chitinase family protein	0.03	OrthoFinder output from all 47 species
AT3G12500	HCHIB, B-CHI,...	basic chitinase	0.02	OrthoFinder output from all 47 species
AT3G47540	No alias	Chitinase family protein	0.02	OrthoFinder output from all 47 species
Aev_g02874	HCHIB, B-CHI,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aev_g37268	HCHIB, B-CHI,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g36519	HCHIB, B-CHI,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene32082.t1	ATEP3, EP3,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene32150.t1	HCHIB, B-CHI,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0001.g000740	No alias	not classified & original description: CDS=1-501	0.03	OrthoFinder output from all 47 species
Azfi_s0001.g000746	ATEP3, EP3,...	not classified & original description: CDS=491-1327	0.02	OrthoFinder output from all 47 species
Azfi_s0001.g000750	ATEP3, EP3,...	not classified & original description: CDS=1-942	0.02	OrthoFinder output from all 47 species
Dcu_g21473	HCHIB, B-CHI,...	not classified & original description: none	0.02	OrthoFinder output from all 47 species
GSVIVT01028243001	No alias	Chitinase 10 OS=Oryza sativa subsp. japonica	0.02	OrthoFinder output from all 47 species
GSVIVT01038111001	ATEP3, EP3,...	Endochitinase EP3 OS=Arabidopsis thaliana	0.03	OrthoFinder output from all 47 species
Gb_03375	No alias	Chitinase 10 OS=Oryza sativa subsp. japonica...	0.02	OrthoFinder output from all 47 species
Gb_20766	No alias	Chitinase 5 OS=Oryza sativa subsp. japonica...	0.02	OrthoFinder output from all 47 species
LOC_Os01g18400.1	LOC_Os01g18400	Chitinase 10 OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
LOC_Os04g09390.1	LOC_Os04g09390	Lectin OS=Oryza sativa subsp. japonica...	0.03	OrthoFinder output from all 47 species
LOC_Os05g33150.1	HCHIB, B-CHI,...	Chitinase 7 OS=Oryza sativa subsp. japonica...	0.02	OrthoFinder output from all 47 species
LOC_Os10g39680.1	HCHIB, B-CHI,...	Chitinase 8 OS=Oryza sativa subsp. japonica...	0.02	OrthoFinder output from all 47 species
Solyc07g009510.1.1	HEL, PR4, PR-4,...	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Solyc10g055800.2.1	HCHIB, B-CHI,...	Basic 30 kDa endochitinase OS=Solanum lycopersicum...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	None	Extended
MF	GO:0004568	chitinase activity	IEA	Interproscan
BP	GO:0006022	aminoglycan metabolic process	None	Extended
BP	GO:0006026	aminoglycan catabolic process	None	Extended
BP	GO:0006030	chitin metabolic process	None	Extended
BP	GO:0006032	chitin catabolic process	IEA	Interproscan
BP	GO:0006040	amino sugar metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009056	catabolic process	None	Extended
BP	GO:0009057	macromolecule catabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0016998	cell wall macromolecule catabolic process	IEA	Interproscan
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044036	cell wall macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044248	cellular catabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044265	cellular macromolecule catabolic process	None	Extended
BP	GO:0046348	amino sugar catabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901071	glucosamine-containing compound metabolic process	None	Extended
BP	GO:1901072	glucosamine-containing compound catabolic process	None	Extended
BP	GO:1901135	carbohydrate derivative metabolic process	None	Extended
BP	GO:1901136	carbohydrate derivative catabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901565	organonitrogen compound catabolic process	None	Extended
BP	GO:1901575	organic substance catabolic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006644	phospholipid metabolic process	IEP	HCCA
BP	GO:0006650	glycerophospholipid metabolic process	IEP	HCCA
MF	GO:0016307	phosphatidylinositol phosphate kinase activity	IEP	HCCA
MF	GO:0043565	sequence-specific DNA binding	IEP	HCCA
BP	GO:0044255	cellular lipid metabolic process	IEP	HCCA
BP	GO:0046486	glycerolipid metabolic process	IEP	HCCA
BP	GO:0046488	phosphatidylinositol metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000726	Glyco_hydro_19_cat	36	233

External Links

No external refs found!

Sam_g00455

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation