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  5. Sam_g00517

Sam_g00517


Description : not classified & original description: none


Gene families : OG0000103 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000103_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g00517
Cluster HCCA: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
Ala_g07435 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08369 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g18366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g18367 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23895 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g24932 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g20670 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g24526 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g30846 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g37123 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g29761 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene52578.t1 Aspi01Gene52578 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67322.t1 Aspi01Gene67322 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g16955 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g28021 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g44617 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g07820 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24864 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g29275 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g48264 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24298 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g37190 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g10359 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10360 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g32154 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g58669 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0012.g005551 No alias not classified & original description: CDS=1-1065 0.02 OrthoFinder output from all 47 species
Sam_g01771 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13525 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g24760 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g45436 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g00415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20327 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006465 signal peptide processing IEP HCCA
BP GO:0016485 protein processing IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0051604 protein maturation IEP HCCA
MF GO:0061630 ubiquitin protein ligase activity IEP HCCA
MF GO:0061659 ubiquitin-like protein ligase activity IEP HCCA
InterPro domains Description Start Stop
IPR000157 TIR_dom 19 139
No external refs found!