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  5. Sam_g00863

Sam_g00863


Description : not classified & original description: none


Gene families : OG0000144 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000144_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g00863
Cluster HCCA: Cluster_3

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00236720 evm_27.TU.AmTr_v1... Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
AT1G12440 No alias A20/AN1-like zinc finger family protein 0.02 OrthoFinder output from all 47 species
AT2G27580 No alias A20/AN1-like zinc finger family protein 0.02 OrthoFinder output from all 47 species
AT2G36320 No alias A20/AN1-like zinc finger family protein 0.02 OrthoFinder output from all 47 species
Adi_g015497 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39179 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g36988 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g09022 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10547 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16249 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os08g33880.1 LOC_Os08g33880 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
LOC_Os09g31200.1 LOC_Os09g31200 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Len_g34382 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_7224g0020 No alias Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Mp4g23510.1 No alias Zinc finger A20 and AN1 domain-containing... 0.03 OrthoFinder output from all 47 species
Ore_g11111 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g07180 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g22151 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0049.g013704 No alias not classified & original description: CDS=1-681 0.02 OrthoFinder output from all 47 species
Solyc01g086960.3.1 Solyc01g086960 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Solyc09g009590.1.1 Solyc09g009590 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species
Solyc11g061770.2.1 Solyc11g061770 Zinc finger A20 and AN1 domain-containing... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005737 cytoplasm IEP HCCA
CC GO:0005778 peroxisomal membrane IEP HCCA
BP GO:0006020 inositol metabolic process IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0016559 peroxisome fission IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
BP GO:0019310 inositol catabolic process IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
CC GO:0031903 microbody membrane IEP HCCA
CC GO:0042579 microbody IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044275 cellular carbohydrate catabolic process IEP HCCA
BP GO:0044282 small molecule catabolic process IEP HCCA
BP GO:0046164 alcohol catabolic process IEP HCCA
BP GO:0046174 polyol catabolic process IEP HCCA
BP GO:0048285 organelle fission IEP HCCA
MF GO:0050113 inositol oxygenase activity IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901616 organic hydroxy compound catabolic process IEP HCCA
InterPro domains Description Start Stop
IPR000058 Znf_AN1 104 140
IPR002653 Znf_A20 23 45
No external refs found!