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  5. Sam_g02332

Sam_g02332


Description : not classified & original description: none


Gene families : OG0000195 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000195_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g02332
Cluster HCCA: Cluster_123

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00272120 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
AMTR_s00119p00120480 evm_27.TU.AmTr_v1... Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
AT1G18280 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.03 OrthoFinder output from all 47 species
AT1G73890 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 OrthoFinder output from all 47 species
AT3G22620 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 OrthoFinder output from all 47 species
AT3G43720 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 OrthoFinder output from all 47 species
AT3G58550 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 OrthoFinder output from all 47 species
AT4G08670 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 OrthoFinder output from all 47 species
AT5G64080 No alias Bifunctional inhibitor/lipid-transfer protein/seed... 0.02 OrthoFinder output from all 47 species
Ala_g28872 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g15133 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene50807.t1 Aspi01Gene50807 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0011.g012661 LTPG1 not classified & original description: CDS=60-632 0.02 OrthoFinder output from all 47 species
Azfi_s0803.g087563 No alias arabinogalactan protein *(Xylogen) & original... 0.04 OrthoFinder output from all 47 species
Cba_g01588 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g15255 No alias arabinogalactan protein *(Xylogen) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g30452 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08140 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008272001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.03 OrthoFinder output from all 47 species
GSVIVT01018008001 No alias Cell wall.cell wall proteins.hydroxyproline-rich... 0.02 OrthoFinder output from all 47 species
Gb_02455 No alias xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Gb_06207 No alias xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
LOC_Os01g59870.1 LOC_Os01g59870 xylogen-type arabinogalactan protein 0.04 OrthoFinder output from all 47 species
LOC_Os03g09230.1 LOC_Os03g09230 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
LOC_Os03g57970.2 LOC_Os03g57970 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
LOC_Os03g57980.1 LOC_Os03g57980 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os06g49770.1 LOC_Os06g49770 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os07g07790.1 LOC_Os07g07790 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
LOC_Os07g07920.1 EDA4, LOC_Os07g07920 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os07g07930.1 LOC_Os07g07930 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
LOC_Os10g11370.1 LOC_Os10g11370 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Len_g14614 No alias arabinogalactan protein *(Xylogen) & original description: none 0.04 OrthoFinder output from all 47 species
Len_g59470 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g25018 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_5581g0010 No alias xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Mp1g22240.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g06385 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g37948 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g44457 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61681 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0073.g017064 No alias arabinogalactan protein *(Xylogen) & original... 0.03 OrthoFinder output from all 47 species
Sam_g33803 No alias arabinogalactan protein *(Xylogen) & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g005985.1.1 Solyc01g005985 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Solyc01g103060.4.1 Solyc01g103060 Lipid transfer-like protein VAS OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Solyc06g054030.2.1 Solyc06g054030 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Solyc06g073660.3.1 Solyc06g073660 xylogen-type arabinogalactan protein 0.03 OrthoFinder output from all 47 species
Solyc08g007460.3.1 Solyc08g007460 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc08g079250.4.1 Solyc08g079250 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc09g065410.4.1 Solyc09g065410 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Solyc09g065430.4.1 Solyc09g065430 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Solyc09g065440.4.1 EDA4, Solyc09g065440 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc09g082300.3.1 EDA4, Solyc09g082300 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g25113 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g30752 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000506_P001 Zm00001e000506 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Zm00001e005960_P003 EDA4, Zm00001e005960 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e005961_P001 Zm00001e005961 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Zm00001e013066_P001 Zm00001e013066 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e028880_P001 Zm00001e028880 xylogen-type arabinogalactan protein 0.02 OrthoFinder output from all 47 species
Zm00001e030289_P001 Zm00001e030289 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
InterPro domains Description Start Stop
IPR016140 Bifunc_inhib/LTP/seed_store 74 161
No external refs found!