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  5. Sam_g02504

Sam_g02504


Description : subunit beta of peripheral CF1 subcomplex of ATP synthase complex & original description: none


Gene families : OG0000973 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000973_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g02504
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00606p00000120 ATPB, PB,... ATP synthase subunit beta, chloroplastic OS=Amborella trichopoda 0.04 OrthoFinder output from all 47 species
ATCG00480 ATPB, PB ATP synthase subunit beta 0.1 OrthoFinder output from all 47 species
Aev_g10806 ATPB, PB subunit beta of peripheral CF1 subcomplex of ATP... 0.14 OrthoFinder output from all 47 species
Aob_g06682 ATPB, PB subunit beta of peripheral CF1 subcomplex of ATP... 0.13 OrthoFinder output from all 47 species
Ceric.02G014100.1 ATPB, PB, Ceric.02G014100 not classified & original description: pacid=50586216... 0.08 OrthoFinder output from all 47 species
Ceric.03G022700.1 ATPB, PB, Ceric.03G022700 subunit beta of peripheral CF1 subcomplex of ATP... 0.11 OrthoFinder output from all 47 species
Ceric.09G048700.1 ATPB, PB, Ceric.09G048700 subunit beta of peripheral CF1 subcomplex of ATP... 0.06 OrthoFinder output from all 47 species
Ceric.1Z141700.1 ATPB, PB, Ceric.1Z141700 subunit beta of peripheral CF1 subcomplex of ATP... 0.1 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001376.3 No alias ATP synthase subunit beta, mitochondrial... 0.02 OrthoFinder output from all 47 species
Cre17.g698000 No alias Cellular respiration.oxidative phosphorylation.ATP... 0.02 OrthoFinder output from all 47 species
Dcu_g20874 ATPB, PB subunit beta of peripheral CF1 subcomplex of ATP... 0.09 OrthoFinder output from all 47 species
GSVIVT01006210001 ATPB, PB ATP synthase subunit beta, chloroplastic OS=Vitis vinifera 0.02 OrthoFinder output from all 47 species
Gb_00175 ATPB, PB ATP synthase subunit beta, chloroplastic OS=Picea abies... 0.04 OrthoFinder output from all 47 species
Gb_11358 ATPB, PB subunit epsilon of peripheral CF1 subcomplex of ATP... 0.04 OrthoFinder output from all 47 species
Gb_22349 ATPB, PB subunit beta of peripheral CF1 subcomplex of ATP synthase complex 0.04 OrthoFinder output from all 47 species
Gb_37463 ATPB, PB subunit epsilon of peripheral CF1 subcomplex of ATP... 0.04 OrthoFinder output from all 47 species
LOC_Os01g25065.1 ATPB, PB, LOC_Os01g25065 ATP synthase subunit beta, chloroplastic OS=Oryza sativa... 0.2 OrthoFinder output from all 47 species
LOC_Os05g35320.1 ATPB, PB, LOC_Os05g35320 ATP synthase subunit beta, chloroplastic OS=Oryza sativa... 0.11 OrthoFinder output from all 47 species
LOC_Os06g39740.1 ATPB, PB, LOC_Os06g39740 subunit beta of peripheral CF1 subcomplex of ATP synthase complex 0.05 OrthoFinder output from all 47 species
LOC_Os10g21266.1 ATPB, PB, LOC_Os10g21266 subunit beta of peripheral CF1 subcomplex of ATP synthase complex 0.19 OrthoFinder output from all 47 species
LOC_Os12g10570.1 ATPB, PB, LOC_Os12g10570 ATP synthase subunit beta, chloroplastic OS=Oryza sativa... 0.17 OrthoFinder output from all 47 species
Lfl_g05507 ATPB, PB subunit beta of peripheral CF1 subcomplex of ATP... 0.15 OrthoFinder output from all 47 species
Ore_g00399 ATPB, PB subunit beta of peripheral CF1 subcomplex of ATP... 0.09 OrthoFinder output from all 47 species
Sacu_v1.1_s0032.g010854 ATPB, PB not classified & original description: CDS=1-264 0.03 OrthoFinder output from all 47 species
Smo236855 ATPB, PB ATP synthase subunit beta, chloroplastic OS=Psilotum nudum 0.03 OrthoFinder output from all 47 species
Solyc07g021180.3.1 ATPB, PB, Solyc07g021180 ATP synthase subunit beta, chloroplastic OS=Nicotiana... 0.03 OrthoFinder output from all 47 species
Spa_g51445 ATPB, PB subunit beta of peripheral CF1 subcomplex of ATP... 0.03 OrthoFinder output from all 47 species
Zm00001e042082_P001 ATPB, PB, Zm00001e042082 ATP synthase subunit beta, chloroplastic OS=Zea mays... 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006164 purine nucleotide biosynthetic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006754 ATP biosynthetic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009142 nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009145 purine nucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009152 purine ribonucleotide biosynthetic process IEP HCCA
BP GO:0009165 nucleotide biosynthetic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009201 ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009206 purine ribonucleoside triphosphate biosynthetic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
BP GO:0009260 ribonucleotide biosynthetic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0015986 proton motive force-driven ATP synthesis IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
CC GO:0034357 photosynthetic membrane IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
CC GO:0042651 thylakoid membrane IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
CC GO:0045263 proton-transporting ATP synthase complex, coupling factor F(o) IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
BP GO:0046390 ribose phosphate biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0072522 purine-containing compound biosynthetic process IEP HCCA
BP GO:0090407 organophosphate biosynthetic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
BP GO:1901135 carbohydrate derivative metabolic process IEP HCCA
BP GO:1901137 carbohydrate derivative biosynthetic process IEP HCCA
BP GO:1901293 nucleoside phosphate biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR004100 ATPase_F1/V1/A1_a/bsu_N 19 91
IPR000194 ATPase_F1/V1/A1_a/bsu_nucl-bd 148 368
No external refs found!