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  5. Sam_g02516

Sam_g02516


Description : not classified & original description: none


Gene families : OG0002239 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002239_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g02516
Cluster HCCA: Cluster_139

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00160p00081520 evm_27.TU.AmTr_v1... Calmodulin binding protein PICBP OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Ala_g14753 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.29G071400.1 Ceric.29G071400 not classified & original description: pacid=50625175... 0.03 OrthoFinder output from all 47 species
Dde_g18611 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g09264 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11954 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g068460.4.1 Solyc01g068460 Calmodulin binding protein PICBP OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Tin_g10398 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR012417 CaM-bd_dom_pln 755 829
No external refs found!