Sam_g02656


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g02656

Target Alias Description ECC score Gene Family Method Actions
AT1G31430 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G14850 LOI1, MEF11 Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G33990 EMB2758 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g002304 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g002365 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g003135 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g006593 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g013973 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g049071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056891 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087178 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g101277 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g105593 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g116582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g34145 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g42810 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g31944 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06363 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06903 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07162 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g14128 CRR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19869 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21502 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30598 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g57869 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g61444 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g62348 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07895 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37946 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g40045 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g38925 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene19894.t1 Aspi01Gene19894 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27806.t1 CRR2, Aspi01Gene27806 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34954.t1 Aspi01Gene34954 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene64343.t1 Aspi01Gene64343 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0005.g009022 No alias not classified & original description: CDS=1-2334 0.04 OrthoFinder output from all 47 species
Azfi_s0006.g010527 No alias not classified & original description: CDS=1-2745 0.03 OrthoFinder output from all 47 species
Azfi_s0009.g011917 No alias not classified & original description: CDS=1-393 0.03 OrthoFinder output from all 47 species
Azfi_s0010.g012366 No alias not classified & original description: CDS=1-2994 0.04 OrthoFinder output from all 47 species
Azfi_s0062.g035255 No alias not classified & original description: CDS=1-1599 0.02 OrthoFinder output from all 47 species
Azfi_s0261.g060752 CRR22 not classified & original description: CDS=1-1500 0.03 OrthoFinder output from all 47 species
Azfi_s0405.g068373 No alias not classified & original description: CDS=1-2967 0.03 OrthoFinder output from all 47 species
Azfi_s0873.g090702 No alias not classified & original description: CDS=1-2778 0.04 OrthoFinder output from all 47 species
Cba_g07466 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34428 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.01G124700.1 Ceric.01G124700 not classified & original description: pacid=50591887... 0.03 OrthoFinder output from all 47 species
Ceric.06G014300.1 Ceric.06G014300 not classified & original description: pacid=50620883... 0.03 OrthoFinder output from all 47 species
Ceric.13G050700.1 Ceric.13G050700 not classified & original description: pacid=50636181... 0.04 OrthoFinder output from all 47 species
Ceric.16G044900.1 Ceric.16G044900 not classified & original description: pacid=50590190... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000342.38 No alias Pentatricopeptide repeat-containing protein At5g02860... 0.01 OrthoFinder output from all 47 species
Dac_g18563 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g32689 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g36959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g12101 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g15886 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22625 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19361 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008407001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
LOC_Os01g15530.1 LOC_Os01g15530 Pentatricopeptide repeat-containing protein At5g56310... 0.02 OrthoFinder output from all 47 species
LOC_Os08g04400.1 LOC_Os08g04400 Pentatricopeptide repeat-containing protein At5g50390,... 0.02 OrthoFinder output from all 47 species
LOC_Os08g13990.1 LOC_Os08g13990 Pentatricopeptide repeat-containing protein At2g37320... 0.03 OrthoFinder output from all 47 species
Len_g45824 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g10515 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g09797 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g24471 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g26512 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g31269 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34519 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g38728 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g40957 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g46077 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24205 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g32012 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01677 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12623 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16422 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g34529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g03156 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06424 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32088 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53545 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53555 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g002995 DOT4 not classified & original description: CDS=1-2349 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0013.g005912 No alias not classified & original description: CDS=1-3210 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0027.g009730 No alias not classified & original description: CDS=1-2454 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0039.g012266 No alias not classified & original description: CDS=1-3753 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0051.g013942 No alias not classified & original description: CDS=1-3669 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0055.g014379 CRR22 not classified & original description: CDS=1-2430 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0059.g015175 No alias not classified & original description: CDS=1-2994 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0072.g016993 No alias not classified & original description: CDS=162-2816 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018966 No alias not classified & original description: CDS=1-2631 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0109.g020573 No alias not classified & original description: CDS=184-1233 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0214.g026000 No alias not classified & original description: CDS=66-1799 0.03 OrthoFinder output from all 47 species
Sam_g37508 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39629 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g47343 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g48011 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo82255 CRR2 Pentatricopeptide repeat-containing protein At4g33990... 0.03 OrthoFinder output from all 47 species
Solyc01g095160.3.1 Solyc01g095160 Pentatricopeptide repeat-containing protein At4g37170... 0.02 OrthoFinder output from all 47 species
Solyc05g023900.1.1 Solyc05g023900 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc06g048900.1.1 Solyc06g048900 Pentatricopeptide repeat-containing protein At2g40720... 0.02 OrthoFinder output from all 47 species
Solyc06g068810.4.1 Solyc06g068810 Pentatricopeptide repeat-containing protein At5g50990... 0.03 OrthoFinder output from all 47 species
Spa_g06871 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g08093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g44841 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06098 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g12995 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g16806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17887 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g23282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g26545 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g29098 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g44315 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e012422_P001 OSB1, Zm00001e012422 ssDNA-binding protein (OSB) 0.02 OrthoFinder output from all 47 species
Zm00001e030553_P001 Zm00001e030553 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 32 55
IPR002885 Pentatricopeptide_repeat 4 27
No external refs found!