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  5. Sam_g03180

Sam_g03180


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g03180
Cluster HCCA: Cluster_37

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00263110 No alias Pentatricopeptide repeat-containing protein At1g03540... 0.02 OrthoFinder output from all 47 species
AMTR_s00008p00241920 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
AMTR_s00057p00151990 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Adi_g014368 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g024957 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g067964 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069020 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g087163 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g094457 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g07982 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g12197 OSB1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g44680 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g14052 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g15073 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g22271 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g24403 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g31182 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06389 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19032 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19301 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g43028 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene43949.t1 OTP84, Aspi01Gene43949 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene68665.t1 CRR22, Aspi01Gene68665 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0011.g012554 No alias not classified & original description: CDS=1-2283 0.02 OrthoFinder output from all 47 species
Azfi_s0168.g054648 No alias not classified & original description: CDS=1-843 0.02 OrthoFinder output from all 47 species
Cba_g07684 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g34697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z084100.1 VAC1, ECB2,... not classified & original description: pacid=50586330... 0.03 OrthoFinder output from all 47 species
Ceric.25G047500.1 Ceric.25G047500 not classified & original description: pacid=50594463... 0.02 OrthoFinder output from all 47 species
Dac_g03363 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g28137 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g35824 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g38701 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g48673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g49796 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g05905 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g07340 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g16378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16419 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g18082 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22176 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22637 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22667 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g24097 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26321 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26395 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g46789 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46795 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g49917 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g50096 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008922001 No alias Pentatricopeptide repeat-containing protein At4g08210... 0.02 OrthoFinder output from all 47 species
LOC_Os03g63560.1 LOC_Os03g63560 OTP70 plastidial RNA splicing factor 0.02 OrthoFinder output from all 47 species
Len_g03890 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g04722 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g07899 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g18945 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g18947 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g30051 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_10428509g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Msp_g18730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g41131 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g43552 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10472 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g19745 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23758 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g27965 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18756 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30911 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g36349 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11826 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12707 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13262 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g31141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57463 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g60415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63846 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g22825 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g29961 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06278 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53730 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g63082 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g003060 No alias not classified & original description: CDS=1-2058 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006276 No alias not classified & original description: CDS=1-1806 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0037.g011793 OTP84 not classified & original description: CDS=139-2724 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0105.g020144 No alias not classified & original description: CDS=1-1437 0.03 OrthoFinder output from all 47 species
Solyc02g069500.1.1 Solyc02g069500 Pentatricopeptide repeat-containing protein At4g21300... 0.02 OrthoFinder output from all 47 species
Tin_g06630 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g10336 EMB2758 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g12143 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP HCCA
MF GO:0008374 O-acyltransferase activity IEP HCCA
BP GO:0008610 lipid biosynthetic process IEP HCCA
MF GO:0016411 acylglycerol O-acyltransferase activity IEP HCCA
MF GO:0016747 acyltransferase activity, transferring groups other than amino-acyl groups IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
BP GO:0045017 glycerolipid biosynthetic process IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 75 120
IPR002885 Pentatricopeptide_repeat 148 165
No external refs found!