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  5. Sam_g03208

Sam_g03208


Description : not classified & original description: none


Gene families : OG0000470 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000470_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g03208
Cluster HCCA: Cluster_43

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00188650 CER1,... Cell wall.cutin and suberin.cuticular lipid... 0.02 OrthoFinder output from all 47 species
Aop_g18595 CER1 aldehyde decarbonylase component *(CER1) of CER1-CER3... 0.03 OrthoFinder output from all 47 species
Cba_g26230 CER3, WAX2, YRE, FLP1 aldehyde-generating component *(CER3) of CER1-CER3... 0.02 OrthoFinder output from all 47 species
Dcu_g13038 CER3, WAX2, YRE, FLP1 aldehyde-generating component *(CER3) of CER1-CER3... 0.02 OrthoFinder output from all 47 species
LOC_Os02g08230.1 CER3, WAX2, YRE,... aldehyde-generating component CER3 of CER1-CER3... 0.03 OrthoFinder output from all 47 species
LOC_Os02g40784.1 CER1, LOC_Os02g40784 aldehyde decarbonylase component CER1 of CER1-CER3... 0.03 OrthoFinder output from all 47 species
LOC_Os09g25850.1 CER3, WAX2, YRE,... aldehyde-generating component CER3 of CER1-CER3... 0.03 OrthoFinder output from all 47 species
MA_10162310g0010 No alias no description available(sp|b8afi3|glo14_orysi : 241.0)... 0.02 OrthoFinder output from all 47 species
MA_10435047g0010 CER3, WAX2, YRE, FLP1 aldehyde-generating component CER3 of CER1-CER3... 0.02 OrthoFinder output from all 47 species
MA_10435069g0020 CER1 aldehyde decarbonylase component CER1 of CER1-CER3... 0.02 OrthoFinder output from all 47 species
MA_19405g0010 CER3, WAX2, YRE, FLP1 no description available(sp|q69pa8|glo11_orysj : 169.0) 0.02 OrthoFinder output from all 47 species
MA_259293g0010 CER1 no description available(sp|b8afi3|glo14_orysi : 180.0) 0.02 OrthoFinder output from all 47 species
MA_39280g0020 No alias Protein CER1-like 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Sam_g08420 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g26985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo137211 CER3, WAX2, YRE, FLP1 Protein ECERIFERUM 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Smo99824 No alias Protein ECERIFERUM 3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Spa_g54942 CER3, WAX2, YRE, FLP1 aldehyde-generating component *(CER3) of CER1-CER3... 0.02 OrthoFinder output from all 47 species
Zm00001e012705_P002 CER1, Zm00001e012705 aldehyde decarbonylase component CER1 of CER1-CER3... 0.02 OrthoFinder output from all 47 species
Zm00001e034209_P002 CER3, WAX2, YRE,... aldehyde-generating component CER3 of CER1-CER3... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005506 iron ion binding IEA Interproscan
BP GO:0008610 lipid biosynthetic process IEA Interproscan
MF GO:0016491 oxidoreductase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR006694 Fatty_acid_hydroxylase 142 232
No external refs found!