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  5. Lfl_g25791

Lfl_g25791 (ROC3)


Aliases : ROC3

Description : EC_5.2 cis-trans-isomerase & original description: none


Gene families : OG0000219 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000219_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g25791
Cluster HCCA: Cluster_120

Target Alias Description ECC score Gene Family Method Actions
AT5G58710 ROC7 rotamase CYP 7 0.02 OrthoFinder output from all 47 species
Adi_g016344 No alias EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Als_g35433 ROC4 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g17479 ROC7 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g53361 No alias EC_5.2 cis-trans-isomerase & original description: none 0.01 OrthoFinder output from all 47 species
Ceric.10G059600.1 ROC7, Ceric.10G059600 EC_5.2 cis-trans-isomerase & original description:... 0.03 OrthoFinder output from all 47 species
Gb_38344 No alias protein folding catalyst 0.03 OrthoFinder output from all 47 species
Lfl_g04440 ROC1 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
MA_69667g0010 ROC3 protein folding catalyst 0.01 OrthoFinder output from all 47 species
Pir_g55179 ROC7 EC_5.2 cis-trans-isomerase & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g06057 ATCYP20-2, CYP20-2 EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0118.g021249 No alias EC_5.2 cis-trans-isomerase & original description: CDS=10-2358 0.02 OrthoFinder output from all 47 species
Sam_g38062 No alias EC_5.2 cis-trans-isomerase & original description: none 0.02 OrthoFinder output from all 47 species
Smo165790 ROC3 Protein modification.protein folding and quality... 0.03 OrthoFinder output from all 47 species
Zm00001e002661_P001 ROC3, Zm00001e002661 protein folding catalyst 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEA Interproscan
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
CC GO:0005783 endoplasmic reticulum IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006457 protein folding IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR002130 Cyclophilin-type_PPIase_dom 10 169
No external refs found!