Description : not classified & original description: none
Gene families : OG0000088 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000088_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00021p00200760 | ARF4,... | RNA biosynthesis.transcriptional activation.B3... | 0.02 | OrthoFinder output from all 47 species | |
| AMTR_s00034p00110140 | ARF4 | RNA biosynthesis.transcriptional activation.B3... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00211p00025860 | MP, IAA24, ARF5,... | RNA biosynthesis.transcriptional activation.B3... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G59750 | ARF1 | auxin response factor 1 | 0.03 | OrthoFinder output from all 47 species | |
| AT5G20730 | TIR5, MSG1,... | Transcriptional factor B3 family protein /... | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g011925 | ARF6 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g084657 | ARF19, IAA22, ARF11 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g103241 | TIR5, MSG1,... | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g32218 | ARF16 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g49574 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g07961 | HSS, ARF1-BP, ARF2, ORE14 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Aop_g08752 | ARF16 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene46203.t2 | ARF1, Aspi01Gene46203 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene46204.t1 | ARF1, Aspi01Gene46204 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene55123.t1 | ARF6, Aspi01Gene55123 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene61150.t1 | ARF16, Aspi01Gene61150 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Azfi_s0271.g061201 | ARF1 | not classified & original description: CDS=77-1246 | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.20G087500.1 | ARF1, Ceric.20G087500 | ARF-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.30G022300.1 | ARF6, Ceric.30G022300 | ARF-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Dac_g20944 | ARF16 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Dcu_g17078 | ARF16 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g12286 | ARF10 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g18587 | ARF16 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g27900 | ARF6 | ARF-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01035205001 | ARF8, ATARF8 | Auxin response factor 12 OS=Oryza sativa subsp. japonica | 0.02 | OrthoFinder output from all 47 species | |
| GSVIVT01037136001 | ARF1 | RNA biosynthesis.transcriptional activation.B3... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g56850.1 | MP, IAA24, ARF5,... | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os10g33940.1 | ARF16, LOC_Os10g33940 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| MA_85955g0010 | ARF19, IAA22, ARF11 | transcription factor (ARF) | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g13886 | ARF16 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g08938 | ARF16 | ARF-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g25925 | ARF16 | ARF-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0084.g018261 | TIR5, MSG1,... | not classified & original description: CDS=484-2670 | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0142.g022838 | ARF1 | ARF-type transcription factor & original description:... | 0.03 | OrthoFinder output from all 47 species | |
| Smo181406 | ARF6 | RNA biosynthesis.transcriptional activation.B3... | 0.02 | OrthoFinder output from all 47 species | |
| Smo424113 | ARF6 | Auxin response factor 6 OS=Arabidopsis thaliana | 0.02 | OrthoFinder output from all 47 species | |
| Solyc06g075150.3.1 | ARF16, Solyc06g075150 | transcription factor (ARF) | 0.01 | OrthoFinder output from all 47 species | |
| Solyc07g016180.3.1 | ARF19, IAA22,... | transcription factor (ARF) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e013639_P001 | ARF19, IAA22,... | transcription factor (ARF) | 0.04 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| MF | GO:0003700 | DNA-binding transcription factor activity | IEP | HCCA |
| MF | GO:0003824 | catalytic activity | IEP | HCCA |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | HCCA |
| BP | GO:0005975 | carbohydrate metabolic process | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| MF | GO:0016787 | hydrolase activity | IEP | HCCA |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| MF | GO:0019783 | ubiquitin-like protein peptidase activity | IEP | HCCA |
| MF | GO:0019786 | Atg8-specific peptidase activity | IEP | HCCA |
| MF | GO:0019842 | vitamin binding | IEP | HCCA |
| MF | GO:0030170 | pyridoxal phosphate binding | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| MF | GO:0070279 | vitamin B6 binding | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0140110 | transcription regulator activity | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
