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  5. Sam_g04982

Sam_g04982


Description : not classified & original description: none


Gene families : OG0000434 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000434_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g04982

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00271590 E12A11, MFT,... Protein MOTHER of FT and TFL1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G65480 FT PEBP (phosphatidylethanolamine-binding protein) family protein 0.02 OrthoFinder output from all 47 species
AT2G27550 ATC centroradialis 0.03 OrthoFinder output from all 47 species
Aev_g39970 TFL-1, TFL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene41692.t1 Aspi01Gene41692 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41693.t1 Aspi01Gene41693 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25078 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g30835 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g12988 E12A11, MFT not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g21989 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g54490.1 FT, LOC_Os01g54490 PEB protein-dependent signalling regulatory protein (PEBP) 0.03 OrthoFinder output from all 47 species
LOC_Os06g06300.1 FT, LOC_Os06g06300 PEB protein-dependent signalling regulatory protein (PEBP) 0.02 OrthoFinder output from all 47 species
LOC_Os06g35940.1 FT, LOC_Os06g35940 PEB protein-dependent signalling regulatory protein (PEBP) 0.02 OrthoFinder output from all 47 species
Len_g53659 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g57185 E12A11, MFT not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g57325 TFL-1, TFL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g30830 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_400747g0010 FT PEB protein-dependent signalling regulatory protein (PEBP) 0.01 OrthoFinder output from all 47 species
Mp2g12650.1 E12A11, MFT PEB protein-dependent signalling regulatory protein (PEBP) 0.01 OrthoFinder output from all 47 species
Msp_g40470 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g47036 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g17134 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g16185 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g00291 E12A11, MFT not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g01960 E12A11, MFT not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g31920 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g01279 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27748 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g33595 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Solyc03g063100.2.1 FT, Solyc03g063100 PEB protein-dependent signalling regulatory protein (PEBP) 0.02 OrthoFinder output from all 47 species
Tin_g35798 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g40601 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g45908 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e019815_P001 FT, Zm00001e019815 PEB protein-dependent signalling regulatory protein (PEBP) 0.02 OrthoFinder output from all 47 species
Zm00001e022651_P001 TFL-1, TFL1,... PEB protein-dependent signalling regulatory protein (PEBP) 0.03 OrthoFinder output from all 47 species
Zm00001e027418_P001 FT, Zm00001e027418 PEB protein-dependent signalling regulatory protein (PEBP) 0.02 OrthoFinder output from all 47 species
Zm00001e031034_P001 E12A11, MFT,... PEB protein-dependent signalling regulatory protein (PEBP) 0.02 OrthoFinder output from all 47 species
Zm00001e032156_P001 FT, Zm00001e032156 PEB protein-dependent signalling regulatory protein (PEBP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP HCCA
MF GO:0004807 triose-phosphate isomerase activity IEP HCCA
MF GO:0005215 transporter activity IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
BP GO:0009116 nucleoside metabolic process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016860 intramolecular oxidoreductase activity IEP HCCA
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
MF GO:0022857 transmembrane transporter activity IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
BP GO:1901657 glycosyl compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR008914 PEBP 76 171
No external refs found!