Sam_g05626

Description : component *(eL33) of large ribosomal-subunit (LSU) proteome & original description: none

Gene families : OG0000881 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000881_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g05626
Cluster	HCCA: Cluster_48

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00029p00195890	evm_27.TU.AmTr_v1...	Protein biosynthesis.cytosolic ribosome.large subunit...	0.02	OrthoFinder output from all 47 species
AT1G07070	No alias	Ribosomal protein L35Ae family protein	0.03	OrthoFinder output from all 47 species
AT1G41880	No alias	Ribosomal protein L35Ae family protein	0.09	OrthoFinder output from all 47 species
AT1G74270	No alias	Ribosomal protein L35Ae family protein	0.05	OrthoFinder output from all 47 species
AT3G55750	No alias	Ribosomal protein L35Ae family protein	0.07	OrthoFinder output from all 47 species
Adi_g031092	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Adi_g092458	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Adi_g107649	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ala_g22035	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Ala_g23556	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Als_g13844	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Aob_g13571	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Aob_g38270	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Aop_g28942	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.07	OrthoFinder output from all 47 species
Aop_g32442	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.07	OrthoFinder output from all 47 species
Aop_g51649	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Cba_g08233	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Cba_g66499	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ceric.13G067800.1	Ceric.13G067800	component *(eL33) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020723.23	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.1	OrthoFinder output from all 47 species
Cre10.g459250	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.11	OrthoFinder output from all 47 species
Dac_g01908	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.08	OrthoFinder output from all 47 species
Dac_g05987	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Dac_g28494	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Dcu_g24483	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Dcu_g24788	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.07	OrthoFinder output from all 47 species
GSVIVT01016386001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.05	OrthoFinder output from all 47 species
GSVIVT01034025001	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.08	OrthoFinder output from all 47 species
Gb_35488	No alias	component RPL35a of LSU proteome component	0.08	OrthoFinder output from all 47 species
LOC_Os02g54470.1	LOC_Os02g54470	component RPL35a of LSU proteome component	0.08	OrthoFinder output from all 47 species
Lfl_g20427	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Lfl_g29504	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Lfl_g31889	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
MA_79041g0010	No alias	component RPL35a of LSU proteome component	0.03	OrthoFinder output from all 47 species
Mp1g11470.1	No alias	component RPL35a of LSU proteome component	0.09	OrthoFinder output from all 47 species
Msp_g38265	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.05	OrthoFinder output from all 47 species
Nbi_g33126	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Nbi_g37313	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Ore_g40048	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Pir_g03777	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Pir_g61207	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Pp3c11_9630V3.1	Pp3c11_9630	Ribosomal protein L35Ae family protein	0.04	OrthoFinder output from all 47 species
Pp3c3_3480V3.1	Pp3c3_3480	Ribosomal protein L35Ae family protein	0.05	OrthoFinder output from all 47 species
Pp3c4_29970V3.1	Pp3c4_29970	Ribosomal protein L35Ae family protein	0.02	OrthoFinder output from all 47 species
Ppi_g23332	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Ppi_g27280	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0278.g027080	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Sam_g00161	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.02	OrthoFinder output from all 47 species
Sam_g06981	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.03	OrthoFinder output from all 47 species
Sam_g24989	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.09	OrthoFinder output from all 47 species
Sam_g28484	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.07	OrthoFinder output from all 47 species
Sam_g38110	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Sam_g38788	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Sam_g42222	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.06	OrthoFinder output from all 47 species
Smo184773	No alias	Protein biosynthesis.cytosolic ribosome.large subunit...	0.04	OrthoFinder output from all 47 species
Solyc03g096360.4.1	Solyc03g096360	component RPL35a of LSU proteome component	0.05	OrthoFinder output from all 47 species
Solyc05g052800.3.1	Solyc05g052800	component RPL35a of LSU proteome component	0.1	OrthoFinder output from all 47 species
Solyc05g052810.4.1	Solyc05g052810	component RPL35a of LSU proteome component	0.1	OrthoFinder output from all 47 species
Spa_g05815	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Spa_g43199	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Tin_g02369	No alias	component *(eL33) of large ribosomal-subunit (LSU)...	0.04	OrthoFinder output from all 47 species
Zm00001e009729_P001	Zm00001e009729	component RPL35a of LSU proteome component	0.07	OrthoFinder output from all 47 species
Zm00001e023741_P003	Zm00001e023741	component RPL35a of LSU proteome component	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0001765	membrane raft assembly	IEP	HCCA
MF	GO:0003746	translation elongation factor activity	IEP	HCCA
CC	GO:0005751	mitochondrial respiratory chain complex IV	IEP	HCCA
BP	GO:0006123	mitochondrial electron transport, cytochrome c to oxygen	IEP	HCCA
BP	GO:0006414	translational elongation	IEP	HCCA
BP	GO:0006417	regulation of translation	IEP	HCCA
BP	GO:0006448	regulation of translational elongation	IEP	HCCA
BP	GO:0006449	regulation of translational termination	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
BP	GO:0009060	aerobic respiration	IEP	HCCA
BP	GO:0009891	positive regulation of biosynthetic process	IEP	HCCA
BP	GO:0009893	positive regulation of metabolic process	IEP	HCCA
BP	GO:0010557	positive regulation of macromolecule biosynthetic process	IEP	HCCA
BP	GO:0010604	positive regulation of macromolecule metabolic process	IEP	HCCA
BP	GO:0010608	post-transcriptional regulation of gene expression	IEP	HCCA
BP	GO:0010628	positive regulation of gene expression	IEP	HCCA
BP	GO:0015980	energy derivation by oxidation of organic compounds	IEP	HCCA
MF	GO:0016620	oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	IEP	HCCA
MF	GO:0016903	oxidoreductase activity, acting on the aldehyde or oxo group of donors	IEP	HCCA
BP	GO:0019646	aerobic electron transport chain	IEP	HCCA
BP	GO:0022900	electron transport chain	IEP	HCCA
BP	GO:0022904	respiratory electron transport chain	IEP	HCCA
BP	GO:0031325	positive regulation of cellular metabolic process	IEP	HCCA
BP	GO:0031328	positive regulation of cellular biosynthetic process	IEP	HCCA
BP	GO:0031579	membrane raft organization	IEP	HCCA
BP	GO:0034248	regulation of amide metabolic process	IEP	HCCA
BP	GO:0034250	positive regulation of amide metabolic process	IEP	HCCA
MF	GO:0043021	ribonucleoprotein complex binding	IEP	HCCA
MF	GO:0043022	ribosome binding	IEP	HCCA
BP	GO:0043243	positive regulation of protein-containing complex disassembly	IEP	HCCA
BP	GO:0043244	regulation of protein-containing complex disassembly	IEP	HCCA
BP	GO:0044854	plasma membrane raft assembly	IEP	HCCA
BP	GO:0044857	plasma membrane raft organization	IEP	HCCA
MF	GO:0044877	protein-containing complex binding	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
CC	GO:0045277	respiratory chain complex IV	IEP	HCCA
BP	GO:0045333	cellular respiration	IEP	HCCA
BP	GO:0045727	positive regulation of translation	IEP	HCCA
BP	GO:0045901	positive regulation of translational elongation	IEP	HCCA
BP	GO:0045905	positive regulation of translational termination	IEP	HCCA
BP	GO:0048518	positive regulation of biological process	IEP	HCCA
BP	GO:0048522	positive regulation of cellular process	IEP	HCCA
BP	GO:0051128	regulation of cellular component organization	IEP	HCCA
BP	GO:0051130	positive regulation of cellular component organization	IEP	HCCA
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	IEP	HCCA
BP	GO:0051246	regulation of protein metabolic process	IEP	HCCA
BP	GO:0051247	positive regulation of protein metabolic process	IEP	HCCA
BP	GO:0061024	membrane organization	IEP	HCCA
CC	GO:0070069	cytochrome complex	IEP	HCCA
BP	GO:0070836	caveola assembly	IEP	HCCA
BP	GO:0071709	membrane assembly	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA
CC	GO:0098803	respiratory chain complex	IEP	HCCA
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001780	Ribosomal_L35A	31	131

External Links

No external refs found!

Sam_g05626

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation