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  5. Sam_g06083

Sam_g06083


Description : regulatory protein *(TET8/9) of extracellular vesicle trafficking & original description: none


Gene families : OG0000199 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000199_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g06083

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00136590 TET8,... Tetraspanin-8 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G18520 TET11 tetraspanin11 0.02 OrthoFinder output from all 47 species
AT2G03840 TET13 tetraspanin13 0.02 OrthoFinder output from all 47 species
AT3G12090 TET6 tetraspanin6 0.03 OrthoFinder output from all 47 species
AT4G30430 TET9 tetraspanin9 0.02 OrthoFinder output from all 47 species
Adi_g016793 TET8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g18386 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.08 OrthoFinder output from all 47 species
Ala_g21756 TET1, TRN2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g30227 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.11 OrthoFinder output from all 47 species
Als_g02930 No alias regulatory protein *(TET8/9) of extracellular vesicle... 0.11 OrthoFinder output from all 47 species
Als_g06087 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.04 OrthoFinder output from all 47 species
Als_g07041 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.04 OrthoFinder output from all 47 species
Aob_g16586 TET10 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05899 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.14 OrthoFinder output from all 47 species
Aop_g17624 TET2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27962.t1 TET8, Aspi01Gene27962 regulatory protein *(TET8/9) of extracellular vesicle... 0.04 OrthoFinder output from all 47 species
Azfi_s0005.g009388 TET1, TRN2 not classified & original description: CDS=156-1070 0.02 OrthoFinder output from all 47 species
Azfi_s0037.g026071 TET8 not classified & original description: CDS=1-1584 0.02 OrthoFinder output from all 47 species
Cba_g02419 TET8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g11158 TET10 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.01G090700.1 TET8, Ceric.01G090700 not classified & original description: pacid=50593002... 0.02 OrthoFinder output from all 47 species
Ceric.09G034400.1 TET8, Ceric.09G034400 regulatory protein *(TET8/9) of extracellular vesicle... 0.05 OrthoFinder output from all 47 species
Ceric.12G073500.1 TET8, Ceric.12G073500 not classified & original description: pacid=50601465... 0.02 OrthoFinder output from all 47 species
Ceric.19G019800.1 TET6, Ceric.19G019800 not classified & original description: pacid=50576730... 0.03 OrthoFinder output from all 47 species
Ceric.33G027300.1 TET8, Ceric.33G027300 regulatory protein *(TET8/9) of extracellular vesicle... 0.08 OrthoFinder output from all 47 species
Ceric.37G039800.1 TET8, Ceric.37G039800 regulatory protein *(TET8/9) of extracellular vesicle... 0.05 OrthoFinder output from all 47 species
Dac_g04597 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Dac_g14278 TET1, TRN2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07380 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.06 OrthoFinder output from all 47 species
Dde_g24827 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.02 OrthoFinder output from all 47 species
Ehy_g14703 TET7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g49630.1 TET6, LOC_Os02g49630 Tetraspanin-8 OS=Arabidopsis thaliana... 0.01 OrthoFinder output from all 47 species
LOC_Os10g35980.1 TET10, LOC_Os10g35980 Tetraspanin-10 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Len_g00564 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Len_g24031 TET8 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g48224 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.09 OrthoFinder output from all 47 species
MA_139843g0010 TET7 Tetraspanin-7 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_141590g0010 TET1, TRN2 Protein TORNADO 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_331856g0010 TET10 Tetraspanin-10 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g04153 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.15 OrthoFinder output from all 47 species
Nbi_g07812 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Pir_g29301 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.01 OrthoFinder output from all 47 species
Pp3c21_1270V3.1 TET8, Pp3c21_1270 tetraspanin8 0.01 OrthoFinder output from all 47 species
Ppi_g15840 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.11 OrthoFinder output from all 47 species
Ppi_g19985 TET8 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004047 TET2 not classified & original description: CDS=106-924 0.03 OrthoFinder output from all 47 species
Smo231326 TET4 Tetraspanin-3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Smo91172 TET10 Tetraspanin-10 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Solyc07g025510.4.1 TET2, Solyc07g025510 Tetraspanin-2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Spa_g04269 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.02 OrthoFinder output from all 47 species
Spa_g05440 TET1, TRN2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g09332 TET2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g39271 TET8 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g39272 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species
Spa_g49405 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.08 OrthoFinder output from all 47 species
Tin_g13587 TET8 regulatory protein *(TET8/9) of extracellular vesicle... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003916 DNA topoisomerase activity IEP HCCA
MF GO:0003918 DNA topoisomerase type II (double strand cut, ATP-hydrolyzing) activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006265 DNA topological change IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0071103 DNA conformation change IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR018499 Tetraspanin/Peripherin 5 248
No external refs found!