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  5. Sam_g06182

Sam_g06182


Description : not classified & original description: none


Gene families : OG0000063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g06182

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00135p00026790 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT3G58450 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT3G62550 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g39099 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06769 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g14297 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g38455 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g44724 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08413 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g66074 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24164.t1 RD2, Aspi01Gene24164 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene24164.t2 RD2, Aspi01Gene24164 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene28484.t1 Aspi01Gene28484 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.07G000800.1 Ceric.07G000800 not classified & original description: pacid=50627155... 0.02 OrthoFinder output from all 47 species
Dac_g29720 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01017725001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os03g53900.1 LOC_Os03g53900 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g11173 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g26258 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10063081g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_14234g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_720108g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp2g04750.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g21502 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28920 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g37342 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g00218 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g02683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20282 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g17799 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc06g009050.3.1 Solyc06g009050 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc06g084540.3.1 Solyc06g084540 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g12961 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g20209 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e016001_P001 Zm00001e016001 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Zm00001e027691_P001 Zm00001e027691 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e039685_P001 Zm00001e039685 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 1 156
No external refs found!