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  5. Sam_g06236

Sam_g06236


Description : WRKY-type transcription factor & original description: none


Gene families : OG0000020 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g06236

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00229970 WRKY48,... RNA biosynthesis.transcriptional activation.WRKY... 0.02 OrthoFinder output from all 47 species
AMTR_s00004p00067720 WRKY48,... RNA biosynthesis.transcriptional activation.WRKY... 0.02 OrthoFinder output from all 47 species
AMTR_s00013p00160270 WRKY75,... RNA biosynthesis.transcriptional activation.WRKY... 0.02 OrthoFinder output from all 47 species
AMTR_s00058p00090300 WRKY4,... RNA biosynthesis.transcriptional activation.WRKY... 0.02 OrthoFinder output from all 47 species
AMTR_s00078p00171140 ATWRKY13,... RNA biosynthesis.transcriptional activation.WRKY... 0.02 OrthoFinder output from all 47 species
AMTR_s00110p00091490 ATWRKY57,... RNA biosynthesis.transcriptional activation.WRKY... 0.02 OrthoFinder output from all 47 species
AT1G18860 WRKY61, ATWRKY61 WRKY DNA-binding protein 61 0.03 OrthoFinder output from all 47 species
AT1G62300 WRKY6, ATWRKY6 WRKY family transcription factor 0.03 OrthoFinder output from all 47 species
AT1G80840 ATWRKY40, WRKY40 WRKY DNA-binding protein 40 0.02 OrthoFinder output from all 47 species
AT2G47260 WRKY23, ATWRKY23 WRKY DNA-binding protein 23 0.03 OrthoFinder output from all 47 species
AT3G01970 ATWRKY45, WRKY45 WRKY DNA-binding protein 45 0.03 OrthoFinder output from all 47 species
AT4G31800 WRKY18, ATWRKY18 WRKY DNA-binding protein 18 0.03 OrthoFinder output from all 47 species
AT5G49520 WRKY48, ATWRKY48 WRKY DNA-binding protein 48 0.02 OrthoFinder output from all 47 species
Adi_g041253 AtWRKY20, WRKY20 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g01407 WRKY23, ATWRKY23 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g03082 WRKY48, ATWRKY48 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g04786 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g13852 WRKY43, ATWRKY43 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g16607 WRKY53, ATWRKY53 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g44349 WRKY4 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g47915 WRKY43, ATWRKY43 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g25778 ATWRKY57, WRKY57 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g35701 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g49283 WRKY3 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16136 ATWRKY71, WRKY71 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g27046 WRKY42, AtWRKY42 WRKY-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g63033 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g69727 ATWRKY71, WRKY71 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene15984.t1 ATWRKY71,... WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g27210 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g27507 ATWRKY50, WRKY50 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g68595 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.13G048400.1 WRKY3, Ceric.13G048400 WRKY-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.24G019100.1 Ceric.24G019100 WRKY-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g45396 WRKY44, TTG2,... WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g23577 WRKY42, AtWRKY42 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g24199 ATWRKY24, WRKY24 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g39064 WRKY56, ATWRKY56 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g23297 WRKY4 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g24743 ATWRKY24, WRKY24 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26866 ATWRKY71, WRKY71 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g27114 WRKY48, ATWRKY48 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008046001 WRKY72, ATWRKY72 RNA biosynthesis.transcriptional activation.WRKY... 0.03 OrthoFinder output from all 47 species
GSVIVT01024624001 WRKY33, ATWRKY33 RNA biosynthesis.transcriptional activation.WRKY... 0.03 OrthoFinder output from all 47 species
GSVIVT01028244001 AtWRKY47, WRKY47 RNA biosynthesis.transcriptional activation.WRKY... 0.02 OrthoFinder output from all 47 species
GSVIVT01030453001 WRKY6, ATWRKY6 RNA biosynthesis.transcriptional activation.WRKY... 0.03 OrthoFinder output from all 47 species
GSVIVT01033063001 WRKY75, ATWRKY75 RNA biosynthesis.transcriptional activation.WRKY... 0.02 OrthoFinder output from all 47 species
GSVIVT01033194001 ATWRKY51, WRKY51 RNA biosynthesis.transcriptional activation.WRKY... 0.05 OrthoFinder output from all 47 species
GSVIVT01035884001 WRKY18, ATWRKY18 RNA biosynthesis.transcriptional activation.WRKY... 0.03 OrthoFinder output from all 47 species
Gb_02625 WRKY75, ATWRKY75 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Gb_05025 ATWRKY71, WRKY71 transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Gb_31953 WRKY4 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Gb_40207 WRKY75, ATWRKY75 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Gb_40257 ATWRKY71, WRKY71 transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
LOC_Os01g09080.1 WRKY72,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
LOC_Os01g14440.1 WRKY6, ATWRKY6,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
LOC_Os01g43650.1 WRKY28,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
LOC_Os01g47560.1 ATWRKY71,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
LOC_Os01g61080.1 WRKY33,... transcription factor (WRKY). transcription factor (WRKY33) 0.02 OrthoFinder output from all 47 species
LOC_Os02g08440.1 ATWRKY40,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
LOC_Os03g20550.1 WRKY46,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
LOC_Os03g21710.1 ATWRKY70,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
LOC_Os05g09020.1 ATWRKY50,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
LOC_Os05g27730.1 WRKY33,... transcription factor (WRKY). transcription factor (WRKY33) 0.02 OrthoFinder output from all 47 species
LOC_Os05g39720.1 WRKY33,... transcription factor (WRKY). transcription factor (WRKY33) 0.03 OrthoFinder output from all 47 species
LOC_Os06g06360.1 WRKY53,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
LOC_Os07g02060.1 ATWRKY57,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
LOC_Os09g25060.1 ATWRKY40,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
LOC_Os09g25070.1 ATWRKY40,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
LOC_Os11g02480.2 WRKY55,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
LOC_Os12g02420.1 WRKY55,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Lfl_g19632 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36039 ATWRKY57, WRKY57 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37875 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_120697g0010 ATWRKY71, WRKY71 transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
MA_310991g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_426605g0010 No alias transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
MA_54954g0010 ATWRKY50, WRKY50 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
MA_7831917g0010 AtWRKY47, WRKY47 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_88437g0010 WRKY6, ATWRKY6 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_93790g0010 ATWRKY71, WRKY71 transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Mp1g24950.1 ATWRKY64, WRKY64 transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Nbi_g01131 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g14130 ATWRKY24, WRKY24 WRKY-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g34132 WRKY75, ATWRKY75 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g36467 WRKY55, ATWRKY55 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g27505 WRKY4 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g33827 WRKY53, ATWRKY53 WRKY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g57356 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19197 WRKY6, ATWRKY6 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29317 No alias WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Smo69423 ATWRKY57, WRKY57 RNA biosynthesis.transcriptional activation.WRKY... 0.02 OrthoFinder output from all 47 species
Solyc02g080890.3.1 WRKY6, ATWRKY6,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Solyc02g094270.2.1 WRKY75,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Solyc03g007380.2.1 AtWRKY41,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Solyc03g113120.4.1 WRKY72,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Solyc03g116890.3.1 ATWRKY40,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Solyc05g050340.4.1 WRKY55,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Solyc08g067360.3.1 ATWRKY40,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Solyc08g081630.2.1 WRKY56,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Solyc12g056750.3.1 ATWRKY51,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Spa_g22422 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g14530 WRKY4 WRKY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011098_P001 WRKY75,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Zm00001e016343_P002 WRKY6, ATWRKY6,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Zm00001e017439_P001 AtWRKY47,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e019418_P001 WRKY33,... transcription factor (WRKY). transcription factor (WRKY33) 0.03 OrthoFinder output from all 47 species
Zm00001e025096_P001 ATWRKY40,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e026828_P002 ATWRKY50,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Zm00001e027301_P001 WRKY54,... transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
Zm00001e027804_P001 WRKY9, ATWRKY9,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e030443_P001 ATWRKY40,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Zm00001e031159_P001 ATWRKY50,... transcription factor (WRKY) 0.04 OrthoFinder output from all 47 species
Zm00001e031901_P001 WRKY33,... transcription factor (WRKY) 0.05 OrthoFinder output from all 47 species
Zm00001e034150_P001 ATWRKY40,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e035859_P001 WRKY46,... transcription factor (WRKY) 0.03 OrthoFinder output from all 47 species
Zm00001e040369_P001 WRKY6, ATWRKY6,... transcription factor (WRKY) 0.02 OrthoFinder output from all 47 species
Zm00001e042185_P001 WRKY33,... transcription factor (WRKY). transcription factor (WRKY33) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
CC GO:0005737 cytoplasm IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0010181 FMN binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP HCCA
MF GO:0016671 oxidoreductase activity, acting on a sulfur group of donors, disulfide as acceptor IEP HCCA
MF GO:0033743 peptide-methionine (R)-S-oxide reductase activity IEP HCCA
InterPro domains Description Start Stop
IPR003657 WRKY_dom 117 174
No external refs found!