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  5. Sam_g06349

Sam_g06349


Description : not classified & original description: none


Gene families : OG0000213 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000213_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g06349
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AT3G60950 No alias C2 calcium/lipid-binding endonuclease/exonuclease/phosphatase 0.02 OrthoFinder output from all 47 species
AT3G61030 No alias Calcium-dependent lipid-binding (CaLB domain) family protein 0.02 OrthoFinder output from all 47 species
Ala_g04840 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.02 OrthoFinder output from all 47 species
Aspi01Gene07575.t1 Aspi01Gene07575 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g02633 NTMC2T1.2, SYTB,... membrane tethering protein (SYT1) of... 0.04 OrthoFinder output from all 47 species
Ceric.1Z077000.1 SYT5, NTMC2T2.1,... not classified & original description: pacid=50588705... 0.02 OrthoFinder output from all 47 species
Ehy_g01520 SYT5, NTMC2T2.1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01016090001 No alias Synaptotagmin-3 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
GSVIVT01024034001 NTMC2T1.2, SYTB,... Synaptotagmin-2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os02g25060.1 NTMC2T1.2, SYTB,... endoplasmic reticulum-plasma membrane tethering protein... 0.04 OrthoFinder output from all 47 species
LOC_Os06g47130.1 NTMC2T1.3, SYT3,... endoplasmic reticulum-plasma membrane tethering protein... 0.02 OrthoFinder output from all 47 species
Lfl_g30929 SYT5, NTMC2T2.1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g05355 SYT5, NTMC2T2.1,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g01232 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g09971 SYT5, NTMC2T2.1,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc08g021940.3.1 SYT5, NTMC2T2.1,... Synaptotagmin-5 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g38493 NTMC2TYPE4, NTMC2T4 not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR039010 Synaptotagmin_SMP 68 247
IPR000008 C2_dom 263 360
No external refs found!