Sam_g06396


Description : not classified & original description: none


Gene families : OG0001063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001063_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g06396

Target Alias Description ECC score Gene Family Method Actions
AT1G19660 No alias Wound-responsive family protein 0.04 OrthoFinder output from all 47 species
Adi_g056122 BBD1, ATBBD1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.32G034400.1 Ceric.32G034400 not classified & original description: pacid=50597704... 0.03 OrthoFinder output from all 47 species
Dcu_g10487 No alias not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ehy_g17902 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_50434g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g11770.1 BBD1, ATBBD1 Bifunctional nuclease 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp2g15780.1 BBD1, ATBBD1 Bifunctional nuclease 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0190.g025268 No alias not classified & original description: CDS=1-1017 0.03 OrthoFinder output from all 47 species
Solyc04g080700.4.1 Solyc04g080700 Bifunctional nuclease 2 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Zm00001e002828_P004 Zm00001e002828 Bifunctional nuclease 2 OS=Oryza sativa subsp. japonica... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR003729 Bi_nuclease_dom 128 233
No external refs found!