Sam_g06616


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g06616

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00181560 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g25360... 0.02 OrthoFinder output from all 47 species
AMTR_s00008p00153950 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.02 OrthoFinder output from all 47 species
AMTR_s00009p00268260 evm_27.TU.AmTr_v1... Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
AMTR_s00010p00259620 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g35030,... 0.03 OrthoFinder output from all 47 species
AMTR_s00016p00259690 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At5g46460,... 0.02 OrthoFinder output from all 47 species
AMTR_s00032p00145640 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
AMTR_s00057p00137550 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g36980,... 0.03 OrthoFinder output from all 47 species
AMTR_s00069p00058270 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g39530... 0.03 OrthoFinder output from all 47 species
AMTR_s00077p00166950 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g14730... 0.02 OrthoFinder output from all 47 species
AMTR_s00083p00015670 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
AMTR_s00084p00089150 OTP86,... Pentatricopeptide repeat-containing protein At3g63370,... 0.02 OrthoFinder output from all 47 species
Adi_g117996 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g06982 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g07157 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g11535 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g32981 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g33525 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g42628 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g48795 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g03943 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g12544 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g17143 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g39787 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06487 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g14625 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g15319 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27584 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g27902 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28681 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g28686 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g29475 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g30469 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37340 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aop_g03749 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g05192 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g07015 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g16516 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28404 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g28412 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g28678 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g68719 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene34799.t1 Aspi01Gene34799 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34895.t1 Aspi01Gene34895 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43851.t1 Aspi01Gene43851 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene43949.t2 OTP84, Aspi01Gene43949 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0119.g046740 No alias not classified & original description: CDS=1-2259 0.05 OrthoFinder output from all 47 species
Azfi_s0652.g081079 No alias not classified & original description: CDS=1-2169 0.06 OrthoFinder output from all 47 species
Cba_g04634 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g06449 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06488 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g06836 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g13544 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g14047 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15323 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19875 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g20727 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g20741 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g21792 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g26306 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g26795 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g29923 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g32894 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g35091 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g35519 No alias ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g36324 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g77402 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.14G008900.1 Ceric.14G008900 not classified & original description: pacid=50634493... 0.04 OrthoFinder output from all 47 species
Ceric.15G008800.1 Ceric.15G008800 not classified & original description: pacid=50639552... 0.05 OrthoFinder output from all 47 species
Dac_g10936 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g14692 OTP84 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g18246 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g19096 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g24591 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g26710 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06501 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07524 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08224 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g08601 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08881 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08911 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g17094 OTP86 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g21447 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g22981 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g45933 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g16795 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g46524 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dde_g47138 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Gb_33328 CRR22 Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
LOC_Os06g15670.1 LOC_Os06g15670 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os08g33700.1 LOC_Os08g33700 Pentatricopeptide repeat-containing protein At3g47530... 0.02 OrthoFinder output from all 47 species
Len_g03781 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18490 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g34035 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g41161 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g05045 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g06151 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06204 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06927 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g07034 EMB2758 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g09843 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g12945 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g14377 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g14546 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g03915 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g13341 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28205 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g28772 No alias ssDNA-binding protein *(OSB) & original description: none 0.06 OrthoFinder output from all 47 species
Msp_g31521 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g32055 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g33976 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g34436 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g42980 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g18027 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g25474 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g27955 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g43377 CRR2 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g04779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05129 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g05130 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05131 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05347 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g06559 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g09754 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g10306 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g12341 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g14351 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g15027 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15736 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g16678 REME1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g17400 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g18087 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g21976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g22914 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g26310 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g27725 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g29795 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30777 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g33393 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34327 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g35928 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g36668 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g38356 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g02824 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g16784 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g18003 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g19566 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g54471 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g57706 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g57910 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g02333 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g03862 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04531 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g11224 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pnu_g15475 OTP82 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g20500 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g27073 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g28658 OTP84 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g30780 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17845 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29583 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g32285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g43237 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g45354 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g48495 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g53366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53684 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ppi_g56301 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0019.g007853 No alias not classified & original description: CDS=1-1137 0.04 OrthoFinder output from all 47 species
Sam_g26608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo96927 EMB2758 Pentatricopeptide repeat-containing protein At3g24000,... 0.02 OrthoFinder output from all 47 species
Smo97139 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.07 OrthoFinder output from all 47 species
Solyc06g053850.4.1 Solyc06g053850 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Spa_g12935 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g25191 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g27468 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04591 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g05956 EMB2758 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06098 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06344 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g09309 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g14007 MEF1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19341 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g21799 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g21956 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g22908 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g23281 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g32426 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g41440 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g43984 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g44131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e026664_P002 Zm00001e026664 RNA editing factor (BLX) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 89 118
IPR046848 E_motif 141 182
IPR002885 Pentatricopeptide_repeat 23 69
No external refs found!