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  5. Lfl_g26028

Lfl_g26028 (ATHSF1, HSF1, HSFA1A, ATHSFA1A)


Aliases : ATHSF1, HSF1, HSFA1A, ATHSFA1A

Description : HSF-type transcription factor & original description: none


Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g26028
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
Ala_g01284 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g32376 HSFB4, SCZ, AT-HSFB4 HSF-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0672.g081792 HSF4, HSFB1,... HSF-type transcription factor & original description: CDS=1-651 0.03 OrthoFinder output from all 47 species
GSVIVT01033257001 AT-HSFB3, HSFB3 RNA biosynthesis.transcriptional activation.HSF (heat... 0.02 OrthoFinder output from all 47 species
LOC_Os09g28200.1 HSFB4, SCZ,... transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
LOC_Os10g28340.1 AT-HSFA6B,... transcription factor (HSF) 0.02 OrthoFinder output from all 47 species
MA_113508g0010 HSFB4, SCZ, AT-HSFB4 transcription factor (HSF) 0.03 OrthoFinder output from all 47 species
MA_13910g0010 HSFB4, SCZ, AT-HSFB4 transcription factor (HSF) 0.04 OrthoFinder output from all 47 species
MA_29913g0010 AT-HSFA6B, HSFA6B transcription factor (HSF). transcriptional regulator (HsfA1) 0.01 OrthoFinder output from all 47 species
Ppi_g07494 AT-HSFA6B, HSFA6B HSF-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0001.g000353 HSFA1E, ATHSFA1E HSF-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Smo93081 ATHSFA1D, HSFA1D RNA biosynthesis.transcriptional activation.HSF (heat... 0.02 OrthoFinder output from all 47 species
Solyc12g007070.2.1 AT-HSFC1, HSFC1,... transcription factor (HSF) 0.01 OrthoFinder output from all 47 species
Zm00001e032930_P002 AT-HSFA6B,... transcription factor (HSF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
MF GO:0043565 sequence-specific DNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
BP GO:0006952 defense response IEP HCCA
InterPro domains Description Start Stop
IPR000232 HSF_DNA-bd 141 230
No external refs found!