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  5. Sam_g06862

Sam_g06862


Description : basal transcription factor *(TFIIb) & original description: none


Gene families : OG0001894 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001894_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g06862

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene07198.t1 Aspi01Gene07198 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0052.g014017 No alias not classified & original description: CDS=59-1057 0.02 OrthoFinder output from all 47 species
Sam_g36950 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0017025 TBP-class protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004649 poly(ADP-ribose) glycohydrolase activity IEP HCCA
BP GO:0006282 regulation of DNA repair IEP HCCA
BP GO:0048583 regulation of response to stimulus IEP HCCA
BP GO:0051052 regulation of DNA metabolic process IEP HCCA
BP GO:0080134 regulation of response to stress IEP HCCA
BP GO:0080135 regulation of cellular response to stress IEP HCCA
BP GO:2001020 regulation of response to DNA damage stimulus IEP HCCA
InterPro domains Description Start Stop
IPR013150 TFIIB_cyclin 203 287
IPR013150 TFIIB_cyclin 101 174
IPR013137 Znf_TFIIB 4 47
No external refs found!