Sam_g07088

Description : E3 ubiquitin ligase *(BRIZ) & original description: none

Gene families : OG0004050 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004050_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g07088
Cluster	HCCA: Cluster_107

Target	Alias	Description	ECC score	Gene Family Method	Actions
Gb_28513	BRIZ2	RING-H2-class E3 ligase	0.02	OrthoFinder output from all 47 species
Solyc03g120000.3.1	BRIZ2, Solyc03g120000	RING-H2-class E3 ligase	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003950	NAD+ ADP-ribosyltransferase activity	IEP	HCCA
MF	GO:0016763	pentosyltransferase activity	IEP	HCCA
MF	GO:0019842	vitamin binding	IEP	HCCA
MF	GO:0030170	pyridoxal phosphate binding	IEP	HCCA
MF	GO:0070279	vitamin B6 binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR001607	Znf_UBP	230	289
IPR001841	Znf_RING	178	219
IPR011422	BRAP2/ETP1_RRM	71	165

External Links

No external refs found!