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  5. Sam_g07127

Sam_g07127


Description : not classified & original description: none


Gene families : OG0000092 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000092_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g07127

Target Alias Description ECC score Gene Family Method Actions
Ala_g02477 ATPUB17, PUB17 E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g13264 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01129.t1 PUB14, ATPUB14,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72934.t1 PUB13, ATPUB13,... E3 ubiquitin ligase *(PUB8) & original description: none 0.03 OrthoFinder output from all 47 species
Cre03.g178550 No alias Dynein assembly factor with WDR repeat domains 1... 0.02 OrthoFinder output from all 47 species
Dcu_g16944 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g02285 ATPUB17, PUB17 E3 ubiquitin ligase *(PUB8) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09283 PUB14, ATPUB14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g20244 PUB13, ATPUB13 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g29462 ATPUB17, PUB17 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR000225 Armadillo 46 85
IPR000225 Armadillo 175 211
No external refs found!