Description : pre-mRNA splicing factor *(SFPS/DRT111) & original description: none
Gene families : OG0007273 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0007273_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sam_g07316 | |
| Cluster | HCCA: Cluster_172 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g106563 | DRT111 | pre-mRNA splicing factor *(SFPS/DRT111) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g10288 | DRT111 | pre-mRNA splicing factor *(SFPS/DRT111) & original... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g10966 | DRT111 | pre-mRNA splicing factor *(SFPS/DRT111) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.11G091900.1 | DRT111, Ceric.11G091900 | pre-mRNA splicing factor *(SFPS/DRT111) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g07931 | DRT111 | pre-mRNA splicing factor *(SFPS/DRT111) & original... | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g10943 | DRT111 | pre-mRNA splicing factor *(SFPS/DRT111) & original... | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000120 | RNA polymerase I transcription regulator complex | IEP | HCCA |
| CC | GO:0000228 | nuclear chromosome | IEP | HCCA |
| BP | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | IEP | HCCA |
| CC | GO:0005667 | transcription regulator complex | IEP | HCCA |
| CC | GO:0005694 | chromosome | IEP | HCCA |
| BP | GO:0006139 | nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0006325 | chromatin organization | IEP | HCCA |
| BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006360 | transcription by RNA polymerase I | IEP | HCCA |
| BP | GO:0006364 | rRNA processing | IEP | HCCA |
| BP | GO:0006725 | cellular aromatic compound metabolic process | IEP | HCCA |
| BP | GO:0016070 | RNA metabolic process | IEP | HCCA |
| BP | GO:0016072 | rRNA metabolic process | IEP | HCCA |
| BP | GO:0030490 | maturation of SSU-rRNA | IEP | HCCA |
| MF | GO:0030515 | snoRNA binding | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0046483 | heterocycle metabolic process | IEP | HCCA |
| BP | GO:0090304 | nucleic acid metabolic process | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| BP | GO:1901360 | organic cyclic compound metabolic process | IEP | HCCA |
| No external refs found! |
