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  5. Sam_g07345

Sam_g07345


Description : EC_3.2 glycosylase & original description: none


Gene families : OG0000477 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000477_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g07345
Cluster HCCA: Cluster_161

Target Alias Description ECC score Gene Family Method Actions
Adi_g024852 BMY5, BAM6 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g01455 BMY5, BAM6 EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g03909 BMY8, BAM3, CT-BMY EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Als_g18488 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g35885 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69400.t1 BMY8, BAM3,... EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G008700.1 BMY5, BAM6,... EC_3.2 glycosylase & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.08G030100.1 BAM1, BMY7,... EC_3.2 glycosylase & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.19G001000.1 BMY8, BAM3,... EC_3.2 glycosylase & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.19G057400.1 BAM1, BMY7,... EC_3.2 glycosylase & original description:... 0.03 OrthoFinder output from all 47 species
Cre06.g270350 BMY8, BAM3, CT-BMY Carbohydrate metabolism.starch... 0.02 OrthoFinder output from all 47 species
Ehy_g06016 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10740 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
LOC_Os03g04770.1 BAM1, BMY7,... beta amylase 0.02 OrthoFinder output from all 47 species
LOC_Os07g35880.1 RAM1, BMY1,... beta amylase 0.03 OrthoFinder output from all 47 species
Len_g10304 BMY5, BAM6 EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g01992 BMY5, BAM6 EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
MA_10432035g0010 BAM1, BMY7, TR-BAMY beta amylase 0.03 OrthoFinder output from all 47 species
MA_10432630g0020 BAM1, BMY7, TR-BAMY beta amylase 0.02 OrthoFinder output from all 47 species
MA_124514g0010 BAM1, BMY7, TR-BAMY beta amylase 0.03 OrthoFinder output from all 47 species
Msp_g16042 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g19249 BMY8, BAM3, CT-BMY EC_3.2 glycosylase & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g16580 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0087.g018480 BAM1, BMY7, TR-BAMY EC_3.2 glycosylase & original description: CDS=293-2071 0.02 OrthoFinder output from all 47 species
Sam_g18356 No alias EC_3.2 glycosylase & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g37874 No alias EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g052690.4.1 RAM1, BMY1,... beta amylase 0.02 OrthoFinder output from all 47 species
Spa_g11839 BMY5, BAM6 EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g14984 BMY8, BAM3, CT-BMY EC_3.2 glycosylase & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e026128_P001 BMY8, BAM3,... beta amylase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0000272 polysaccharide catabolic process IEA Interproscan
MF GO:0016161 beta-amylase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR001554 Glyco_hydro_14 8 431
No external refs found!