Description : not classified & original description: none
Gene families : OG0000642 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000642_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g001943 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g28750 | BPA1 | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ala_g14819 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g22163 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g11474 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g19115 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dcu_g07449 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Dde_g00344 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g11503 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01020030001 | No alias | Binding partner of ACD11 1 OS=Arabidopsis thaliana | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g53770.1 | LOC_Os03g53770 | Binding partner of ACD11 1 OS=Arabidopsis thaliana... | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os04g54870.1 | LOC_Os04g54870 | Binding partner of ACD11 1 OS=Arabidopsis thaliana... | 0.03 | OrthoFinder output from all 47 species | |
| Len_g13573 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g03642 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g07946 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pir_g16319 | BPA1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pp3c19_9760V3.1 | Pp3c19_9760 | RNA-binding (RRM/RBD/RNP motifs) family protein | 0.01 | OrthoFinder output from all 47 species | |
| Ppi_g00654 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ppi_g02734 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003723 | RNA binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000151 | ubiquitin ligase complex | IEP | HCCA |
| CC | GO:0000152 | nuclear ubiquitin ligase complex | IEP | HCCA |
| BP | GO:0000375 | RNA splicing, via transesterification reactions | IEP | HCCA |
| BP | GO:0000377 | RNA splicing, via transesterification reactions with bulged adenosine as nucleophile | IEP | HCCA |
| BP | GO:0000398 | mRNA splicing, via spliceosome | IEP | HCCA |
| MF | GO:0004386 | helicase activity | IEP | HCCA |
| MF | GO:0004478 | methionine adenosyltransferase activity | IEP | HCCA |
| CC | GO:0005680 | anaphase-promoting complex | IEP | HCCA |
| BP | GO:0006397 | mRNA processing | IEP | HCCA |
| BP | GO:0006556 | S-adenosylmethionine biosynthetic process | IEP | HCCA |
| BP | GO:0006790 | sulfur compound metabolic process | IEP | HCCA |
| BP | GO:0006890 | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | IEP | HCCA |
| BP | GO:0007346 | regulation of mitotic cell cycle | IEP | HCCA |
| BP | GO:0008380 | RNA splicing | IEP | HCCA |
| BP | GO:0010257 | NADH dehydrogenase complex assembly | IEP | HCCA |
| BP | GO:0010564 | regulation of cell cycle process | IEP | HCCA |
| BP | GO:0016071 | mRNA metabolic process | IEP | HCCA |
| MF | GO:0016765 | transferase activity, transferring alkyl or aryl (other than methyl) groups | IEP | HCCA |
| BP | GO:0030071 | regulation of mitotic metaphase/anaphase transition | IEP | HCCA |
| CC | GO:0030532 | small nuclear ribonucleoprotein complex | IEP | HCCA |
| CC | GO:0031461 | cullin-RING ubiquitin ligase complex | IEP | HCCA |
| BP | GO:0032981 | mitochondrial respiratory chain complex I assembly | IEP | HCCA |
| BP | GO:0033043 | regulation of organelle organization | IEP | HCCA |
| BP | GO:0033044 | regulation of chromosome organization | IEP | HCCA |
| BP | GO:0033045 | regulation of sister chromatid segregation | IEP | HCCA |
| BP | GO:0033108 | mitochondrial respiratory chain complex assembly | IEP | HCCA |
| BP | GO:0044272 | sulfur compound biosynthetic process | IEP | HCCA |
| BP | GO:0046500 | S-adenosylmethionine metabolic process | IEP | HCCA |
| CC | GO:0046540 | U4/U6 x U5 tri-snRNP complex | IEP | HCCA |
| BP | GO:0048193 | Golgi vesicle transport | IEP | HCCA |
| BP | GO:0051128 | regulation of cellular component organization | IEP | HCCA |
| BP | GO:0051726 | regulation of cell cycle | IEP | HCCA |
| BP | GO:0051983 | regulation of chromosome segregation | IEP | HCCA |
| CC | GO:0097525 | spliceosomal snRNP complex | IEP | HCCA |
| CC | GO:0097526 | spliceosomal tri-snRNP complex | IEP | HCCA |
| CC | GO:0120114 | Sm-like protein family complex | IEP | HCCA |
| CC | GO:0140513 | nuclear protein-containing complex | IEP | HCCA |
| BP | GO:1901987 | regulation of cell cycle phase transition | IEP | HCCA |
| BP | GO:1901990 | regulation of mitotic cell cycle phase transition | IEP | HCCA |
| BP | GO:1902099 | regulation of metaphase/anaphase transition of cell cycle | IEP | HCCA |
| CC | GO:1990234 | transferase complex | IEP | HCCA |
| CC | GO:1990904 | ribonucleoprotein complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000504 | RRM_dom | 7 | 66 |
| No external refs found! |
