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  5. Sam_g07486

Sam_g07486


Description : not classified & original description: none


Gene families : OG0000642 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000642_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g07486
Cluster HCCA: Cluster_33

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00004p00125270 evm_27.TU.AmTr_v1... Binding partner of ACD11 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Adi_g022185 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g115931 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aev_g16560 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g14819 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g22163 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11474 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Als_g19115 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Als_g21309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g37925 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03086 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene64150.t1 Aspi01Gene64150 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Azfi_s0006.g009796 No alias not classified & original description: CDS=86-811 0.04 OrthoFinder output from all 47 species
Azfi_s0130.g049026 No alias not classified & original description: CDS=251-1009 0.02 OrthoFinder output from all 47 species
Cba_g14713 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.05G062300.1 Ceric.05G062300 not classified & original description: pacid=50578128... 0.03 OrthoFinder output from all 47 species
Dac_g13809 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g07449 No alias not classified & original description: none 0.09 OrthoFinder output from all 47 species
Dcu_g09629 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g23747 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g02086 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04385 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g19804 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011624001 No alias Binding partner of ACD11 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os03g50560.1 LOC_Os03g50560 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os04g50790.1 LOC_Os04g50790 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os04g54870.1 LOC_Os04g54870 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Len_g55926 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g03642 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ore_g11240 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g30081 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g30567 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g38160 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 8 67
No external refs found!