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  5. Sam_g07744

Sam_g07744


Description : not classified & original description: none


Gene families : OG0000063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g07744
Cluster HCCA: Cluster_122

Target Alias Description ECC score Gene Family Method Actions
AT1G09740 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G21620 RD2 Adenine nucleotide alpha hydrolases-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G62550 No alias Adenine nucleotide alpha hydrolases-like superfamily protein 0.05 OrthoFinder output from all 47 species
Ala_g05790 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38455 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g15484 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene55688.t1 Aspi01Gene55688 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66771.t1 Aspi01Gene66771 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0157.g053757 No alias not classified & original description: CDS=268-750 0.03 OrthoFinder output from all 47 species
Cba_g05574 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G009300.1 Ceric.06G009300 not classified & original description: pacid=50619371... 0.03 OrthoFinder output from all 47 species
Dcu_g20927 RD2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g23687 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02307 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g19357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009157001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_20328 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_22452 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_32427 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
LOC_Os02g47650.1 RD2, LOC_Os02g47650 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os05g28740.1 LOC_Os05g28740 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Len_g48312 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g27197 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g34167 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g20177 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g02044 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g04636 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g43664 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g00265 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g31529 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g64165 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g002981 No alias not classified & original description: CDS=1-528 0.03 OrthoFinder output from all 47 species
Solyc09g011660.3.1 Solyc09g011660 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g00638 ATPHOS34, PHOS34 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g38853 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004645 1,4-alpha-oligoglucan phosphorylase activity IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
MF GO:0008184 glycogen phosphorylase activity IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009536 plastid IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 10 159
No external refs found!