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  5. Sam_g07887

Sam_g07887


Description : not classified & original description: none


Gene families : OG0000659 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000659_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g07887

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00039p00230320 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G04530 TPR4 Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G80130 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G17940 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT5G20190 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g082811 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g03976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g12548 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g56500 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13918 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g36474 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene05479.t1 Aspi01Gene05479 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene07571.t1 Aspi01Gene07571 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12177.t1 Aspi01Gene12177 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene44596.t2 Aspi01Gene44596 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g21251 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01013133001 No alias No description available 0.02 OrthoFinder output from all 47 species
Gb_29793 No alias no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os10g42610.1 LOC_Os10g42610 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g11380 TPR4 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39195 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10426506g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
MA_13355g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_84234g0020 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g07073 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05147 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc07g008210.4.1 Solyc07g008210 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Tin_g18837 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0008037 cell recognition IEP HCCA
MF GO:0016887 ATP hydrolysis activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0046422 violaxanthin de-epoxidase activity IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR019734 TPR_repeat 265 293
No external refs found!