Sam_g08102


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g08102

Target Alias Description ECC score Gene Family Method Actions
Adi_g003181 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004298 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004418 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g004488 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g005632 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g022147 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g034792 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g034839 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036547 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g036720 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g069038 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g097754 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g099342 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g101277 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g06254 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g09730 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g42281 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g48329 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13016 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g19032 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g27208 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g33528 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g54758 EMB2758 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g28195 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g36682 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16384 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g26015 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g43404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08612.t1 Aspi01Gene08612 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25991.t1 CRR22, Aspi01Gene25991 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene25991.t2 Aspi01Gene25991 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34013.t1 Aspi01Gene34013 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34758.t1 Aspi01Gene34758 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41281.t1 OTP84, Aspi01Gene41281 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene43278.t1 Aspi01Gene43278 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49892.t2 Aspi01Gene49892 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene64841.t1 Aspi01Gene64841 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene65846.t1 OSB3, Aspi01Gene65846 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene72349.t1 EMB2758, Aspi01Gene72349 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0005.g009381 No alias not classified & original description: CDS=1-2946 0.02 OrthoFinder output from all 47 species
Azfi_s0028.g023799 No alias not classified & original description: CDS=1-1911 0.03 OrthoFinder output from all 47 species
Azfi_s0034.g025187 OTP84 not classified & original description: CDS=1-2199 0.02 OrthoFinder output from all 47 species
Azfi_s0075.g037545 No alias not classified & original description: CDS=1-2337 0.02 OrthoFinder output from all 47 species
Azfi_s0544.g076391 No alias not classified & original description: CDS=1-906 0.03 OrthoFinder output from all 47 species
Azfi_s1396.g102567 No alias not classified & original description: CDS=1-1371 0.03 OrthoFinder output from all 47 species
Cba_g04081 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05315 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g05966 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06575 VAC1, ECB2, ATECB2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g06583 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g07181 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07404 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07724 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07752 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g14728 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g17193 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19307 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20249 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g20828 CRR22 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g20886 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g29847 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35519 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g46020 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67233 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67240 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67737 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g74873 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g75407 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.21G004000.1 Ceric.21G004000 not classified & original description: pacid=50604228... 0.03 OrthoFinder output from all 47 species
Dac_g12138 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g18369 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g30123 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g32152 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g32204 OSB3 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g43213 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g14626 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36025 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45110 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g46775 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g05108 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g16093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18944 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g21664 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22315 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23238 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25734 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g36877 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g48000 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01035491001 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
GSVIVT01038381001 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Len_g03278 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g03881 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g05389 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g14977 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18314 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18985 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g24370 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g25859 REME1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g29833 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g33285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g37283 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g54485 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g54953 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g55833 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g59693 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g59884 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g07126 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07688 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g07847 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g23637 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_597g0020 DOT4 Pentatricopeptide repeat-containing protein At4g02750... 0.02 OrthoFinder output from all 47 species
Msp_g03152 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g07558 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g16923 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17711 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g17723 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g27086 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g28772 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g33667 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g34536 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g36814 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g40180 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g43552 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g05483 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10800 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g11485 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g18027 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g38632 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g14351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02967 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g03036 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g10265 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11385 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11784 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12550 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12790 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g35144 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g56915 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63485 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63626 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g63883 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03458 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g04329 LPA66 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g22252 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22600 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g26686 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g29950 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g30309 CRR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c17_4890V3.1 Pp3c17_4890 mitochondrial editing factor 22 0.01 OrthoFinder output from all 47 species
Ppi_g04714 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04988 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g06375 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g10348 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g31163 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g56659 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g61335 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001920 OTP86 not classified & original description: CDS=1-2427 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0040.g012420 No alias not classified & original description: CDS=519-2384 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0044.g012960 No alias not classified & original description: CDS=516-2783 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0076.g017463 No alias not classified & original description: CDS=1-2316 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019387 REME1 not classified & original description: CDS=1-1161 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0157.g023739 No alias not classified & original description: CDS=1-3168 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0262.g026911 REME1 not classified & original description: CDS=1-1512 0.03 OrthoFinder output from all 47 species
Sam_g02448 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07135 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g07175 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g11177 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g12346 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13631 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13864 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g16791 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g19471 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g22472 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g22788 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24543 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24878 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g25056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27930 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28767 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g36269 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39629 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g39881 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g43221 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g51779 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g051480.1.1 OTP84, Solyc04g051480 Pentatricopeptide repeat-containing protein At4g13650... 0.02 OrthoFinder output from all 47 species
Spa_g03178 REME1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g06686 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g07289 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g22619 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g23138 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g28071 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g29950 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g43840 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g04696 CRR22 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g05882 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g06632 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g46234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e007462_P001 Zm00001e007462 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Zm00001e031693_P001 Zm00001e031693 Pentatricopeptide repeat-containing protein At4g14050,... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004371 glycerone kinase activity IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006071 glycerol metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019400 alditol metabolic process IEP HCCA
BP GO:0019751 polyol metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 384 413
IPR002885 Pentatricopeptide_repeat 659 681
IPR002885 Pentatricopeptide_repeat 283 311
IPR002885 Pentatricopeptide_repeat 255 280
IPR002885 Pentatricopeptide_repeat 482 529
IPR002885 Pentatricopeptide_repeat 583 630
IPR002885 Pentatricopeptide_repeat 78 126
IPR002885 Pentatricopeptide_repeat 179 226
No external refs found!