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  5. Sam_g08608

Sam_g08608


Description : not classified & original description: none


Gene families : OG0001054 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001054_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g08608
Cluster HCCA: Cluster_46

Target Alias Description ECC score Gene Family Method Actions
Aop_g34288 No alias not classified & original description: none 0.16 OrthoFinder output from all 47 species
Aop_g43689 No alias not classified & original description: none 0.14 OrthoFinder output from all 47 species
Aop_g55203 No alias not classified & original description: none 0.24 OrthoFinder output from all 47 species
Aop_g56127 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Aop_g60247 No alias not classified & original description: none 0.16 OrthoFinder output from all 47 species
Dac_g37200 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50879 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g51452 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g35430 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g35781 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g47225 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g05393 No alias not classified & original description: none 0.17 OrthoFinder output from all 47 species
Sam_g11516 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g12751 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g14516 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g23245 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g24294 No alias not classified & original description: none 0.12 OrthoFinder output from all 47 species
Sam_g24607 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g24608 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29021 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g29449 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g29633 No alias not classified & original description: none 0.16 OrthoFinder output from all 47 species
Sam_g33789 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Sam_g37012 No alias not classified & original description: none 0.16 OrthoFinder output from all 47 species
Sam_g37201 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Sam_g44544 No alias not classified & original description: none 0.16 OrthoFinder output from all 47 species
Sam_g45195 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g46286 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g50253 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g50364 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g52214 No alias not classified & original description: none 0.13 OrthoFinder output from all 47 species
Spa_g37364 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA Interproscan
BP GO:0006508 proteolysis IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004181 metallocarboxypeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0004519 endonuclease activity IEP HCCA
MF GO:0004521 endoribonuclease activity IEP HCCA
MF GO:0004540 ribonuclease activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
MF GO:0008235 metalloexopeptidase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0016298 lipase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR001254 Trypsin_dom 7 202
No external refs found!