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  5. Sam_g08760

Sam_g08760


Description : not classified & original description: none


Gene families : OG0000154 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000154_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g08760

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00060p00203670 JAI3, JAZ3,... RNA biosynthesis.transcriptional activation.TIFY... 0.03 OrthoFinder output from all 47 species
AT1G70700 JAZ9, TIFY7 TIFY domain/Divergent CCT motif family protein 0.02 OrthoFinder output from all 47 species
AT1G74950 TIFY10B, JAZ2 TIFY domain/Divergent CCT motif family protein 0.04 OrthoFinder output from all 47 species
AT3G43440 JAZ11, TIFY3A jasmonate-zim-domain protein 11 0.02 OrthoFinder output from all 47 species
AT5G20900 JAZ12, TIFY3B jasmonate-zim-domain protein 12 0.03 OrthoFinder output from all 47 species
Ala_g04395 JAI3, JAZ3, TIFY6B TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g07924 JAZ9, TIFY7 TIFY-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Als_g12726 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g27866 JAZ4, TIFY6A TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g38630 JAZ4, TIFY6A TIFY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g47696 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g49957 JAI3, JAZ3, TIFY6B TIFY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g61987 JAI3, JAZ3, TIFY6B TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05216 JAZ4, TIFY6A TIFY-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g35874 JAZ12, TIFY3B TIFY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0006.g010047 TIFY8 not classified & original description: CDS=1-762 0.03 OrthoFinder output from all 47 species
Cba_g11553 JAZ4, TIFY6A TIFY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g45702 PPD2, TIFY4B not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01016721001 TIFY10A, JAZ1 RNA biosynthesis.transcriptional activation.TIFY... 0.03 OrthoFinder output from all 47 species
Gb_19069 TIFY10B, JAZ2 transcription factor (TIFY) 0.02 OrthoFinder output from all 47 species
Gb_38099 JAI3, JAZ3, TIFY6B transcription factor (TIFY) 0.03 OrthoFinder output from all 47 species
LOC_Os03g08330.1 TIFY10A, JAZ1,... transcription factor (TIFY) 0.02 OrthoFinder output from all 47 species
LOC_Os09g26780.1 TIFY10A, JAZ1,... transcription factor (TIFY) 0.02 OrthoFinder output from all 47 species
LOC_Os10g25290.1 TIFY10B, JAZ2,... transcription factor (TIFY) 0.02 OrthoFinder output from all 47 species
MA_6326g0010 JAI3, JAZ3, TIFY6B transcription factor (TIFY) 0.02 OrthoFinder output from all 47 species
Mp6g06230.1 JAI3, JAZ3, TIFY6B transcription factor (TIFY) 0.02 OrthoFinder output from all 47 species
Solyc01g005440.4.1 JAI3, JAZ3,... transcription factor (TIFY) 0.03 OrthoFinder output from all 47 species
Solyc03g122190.3.1 TIFY10B, JAZ2,... transcription factor (TIFY) 0.03 OrthoFinder output from all 47 species
Solyc07g042170.3.1 TIFY10B, JAZ2,... component JAZ of jasmonic acid receptor complex.... 0.03 OrthoFinder output from all 47 species
Solyc12g009220.2.1 TIFY10A, JAZ1,... component JAZ of jasmonic acid receptor complex.... 0.03 OrthoFinder output from all 47 species
Zm00001e000588_P001 Zm00001e000588 transcription factor (TIFY) 0.05 OrthoFinder output from all 47 species
Zm00001e000590_P001 TIFY10A, JAZ1,... transcription factor (TIFY) 0.03 OrthoFinder output from all 47 species
Zm00001e006083_P001 TIFY10B, JAZ2,... no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e010767_P001 TIFY10B, JAZ2,... component JAZ of jasmonic acid receptor complex.... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR010399 Tify_dom 24 55
No external refs found!