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  5. Sam_g08782

Sam_g08782


Description : not classified & original description: none


Gene families : OG0000063 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000063_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g08782

Target Alias Description ECC score Gene Family Method Actions
Aev_g18351 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g06769 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g38455 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g38527 RD2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g38955 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g44724 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g05601 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0489.g073515 No alias not classified & original description: CDS=471-992 0.04 OrthoFinder output from all 47 species
Ceric.01G060600.1 Ceric.01G060600 not classified & original description: pacid=50591630... 0.02 OrthoFinder output from all 47 species
Ceric.27G027100.1 Ceric.27G027100 not classified & original description: pacid=50605849... 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000842.5 No alias No description available 0.02 OrthoFinder output from all 47 species
Cre12.g542350 PHOS32, ATPHOS32 No description available 0.02 OrthoFinder output from all 47 species
Dac_g29720 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g43626 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01027993001 No alias No description available 0.02 OrthoFinder output from all 47 species
GSVIVT01031226001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os01g32780.1 LOC_Os01g32780 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os02g47650.1 RD2, LOC_Os02g47650 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Lfl_g26567 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g27197 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10435390g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_18127g0010 RD2 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_61335g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Mp1g02950.1 No alias Universal stress protein PHOS32 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g00168 RD2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g32113 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g23590 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g26979 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03351 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g00265 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g55445 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g59165 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc01g059930.3.1 Solyc01g059930 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Solyc09g011660.3.1 Solyc09g011660 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Spa_g04782 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g17338 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e025878_P001 Zm00001e025878 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR006016 UspA 24 135
No external refs found!