Sam_g09038

Description : RNA splicing regulator *(NSR) & original description: none

Gene families : OG0000722 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000722_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g09038

Target	Alias	Description	ECC score	Gene Family Method
Adi_g044793	No alias	RNA splicing regulator *(NSR) & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g055617	No alias	RNA splicing regulator *(NSR) & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g078114	No alias	RNA splicing regulator *(NSR) & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g05031	No alias	RNA splicing regulator *(NSR) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g04447	No alias	RNA splicing regulator *(NSR) & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g27604	No alias	RNA splicing regulator *(NSR) & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005515	protein binding	IEP	HCCA
BP	GO:0006364	rRNA processing	IEP	HCCA
BP	GO:0006396	RNA processing	IEP	HCCA
BP	GO:0016072	rRNA metabolic process	IEP	HCCA
BP	GO:0034470	ncRNA processing	IEP	HCCA
BP	GO:0034660	ncRNA metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000504	RRM_dom	145	214

External Links

No external refs found!