Sam_g09077


Description : not classified & original description: none


Gene families : OG0000103 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000103_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g09077
Cluster HCCA: Cluster_136

Target Alias Description ECC score Gene Family Method Actions
Adi_g058788 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g10366 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14605 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14794 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g31484 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g32496 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36112 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g36484 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38851 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g39272 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g23895 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g24932 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g20670 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g29761 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene67322.t1 Aspi01Gene67322 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G084600.1 Ceric.02G084600 not classified & original description: pacid=50585823... 0.03 OrthoFinder output from all 47 species
Dac_g16955 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g45722 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g16000 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18530 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24383 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g29275 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g50870 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g44125 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g47947 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g10359 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g20481 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g58669 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g58670 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g47410 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g56993 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012832 No alias not classified & original description: CDS=1-630 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0043.g012835 No alias not classified & original description: CDS=1-597 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0180.g024798 No alias not classified & original description: CDS=1-1488 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s1786.g028162 No alias not classified & original description: CDS=1-1269 0.03 OrthoFinder output from all 47 species
Sam_g13526 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g24760 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g26471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g34659 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40443 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g19938 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g21861 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g32738 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g35299 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g40089 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0004096 catalase activity IEP HCCA
MF GO:0004601 peroxidase activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016209 antioxidant activity IEP HCCA
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!