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  5. Sam_g09164

Sam_g09164


Description : component *(uS8) of small ribosomal-subunit (SSU) proteome & original description: none


Gene families : OG0001724 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001724_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g09164

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00192110 RPS15A,... Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder output from all 47 species
AT1G07770 RPS15A ribosomal protein S15A 0.08 OrthoFinder output from all 47 species
AT3G46040 RPS15AD ribosomal protein S15A D 0.04 OrthoFinder output from all 47 species
AT5G59850 No alias Ribosomal protein S8 family protein 0.06 OrthoFinder output from all 47 species
Adi_g124065 RPS15A component *(uS8) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Ala_g32909 RPS15A component *(uS8) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Als_g06762 RPS15A component *(uS8) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Aob_g00427 RPS15A component *(uS8) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Aop_g23610 RPS15A component *(uS8) of small ribosomal-subunit (SSU)... 0.06 OrthoFinder output from all 47 species
Azfi_s0035.g025499 RPS15A component *(uS8) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
Azfi_s0073.g037095 RPS15A component *(uS8) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Azfi_s0078.g038157 RPS15A component *(uS8) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Ceric.10G044000.1 RPS15A, Ceric.10G044000 component *(uS8) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Cre05.g234637 RPS15A Protein biosynthesis.cytosolic ribosome.small subunit... 0.06 OrthoFinder output from all 47 species
Dac_g06585 RPS15A component *(uS8) of small ribosomal-subunit (SSU)... 0.04 OrthoFinder output from all 47 species
GSVIVT01016595001 RPS15A Protein biosynthesis.cytosolic ribosome.small subunit... 0.04 OrthoFinder output from all 47 species
Gb_37191 RPS15A component RPS15a of SSU proteome 0.04 OrthoFinder output from all 47 species
LOC_Os02g27760.1 RPS15A, LOC_Os02g27760 component RPS15a of SSU proteome 0.04 OrthoFinder output from all 47 species
LOC_Os07g10720.1 RPS15A, LOC_Os07g10720 component RPS15a of SSU proteome 0.04 OrthoFinder output from all 47 species
MA_10427318g0020 RPS15AD component RPS15a of SSU proteome 0.02 OrthoFinder output from all 47 species
MA_57835g0010 RPS15AD component RPS15a of SSU proteome 0.04 OrthoFinder output from all 47 species
MA_82191g0010 RPS15AD component RPS15a of SSU proteome 0.03 OrthoFinder output from all 47 species
Mp8g06510.1 RPS15A component RPS15a of SSU proteome 0.06 OrthoFinder output from all 47 species
Mp8g13010.1 RPS15A component RPS15a of SSU proteome 0.05 OrthoFinder output from all 47 species
Msp_g41302 RPS15A component *(uS8) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Pp3c1_4290V3.1 RPS15A, Pp3c1_4290 Ribosomal protein S8 family protein 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0130.g022035 RPS15A component *(uS8) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Solyc04g150158.1.1 RPS15A, Solyc04g150158 component RPS15a of SSU proteome 0.05 OrthoFinder output from all 47 species
Solyc04g150159.1.1 RPS15A, Solyc04g150159 component RPS15a of SSU proteome 0.02 OrthoFinder output from all 47 species
Spa_g17843 RPS15A component *(uS8) of small ribosomal-subunit (SSU)... 0.05 OrthoFinder output from all 47 species
Spa_g17844 RPS15A component *(uS8) of small ribosomal-subunit (SSU)... 0.03 OrthoFinder output from all 47 species
Spa_g29032 RPS15A component *(uS8) of small ribosomal-subunit (SSU)... 0.02 OrthoFinder output from all 47 species
Zm00001e016394_P001 RPS15A, Zm00001e016394 component RPS15a of SSU proteome 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR000630 Ribosomal_S8 7 130
No external refs found!