Sam_g09775

Description : WRKY-type transcription factor & original description: none

Gene families : OG0000132 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000132_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g09775

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00053p00025460	WRKY22,...	RNA biosynthesis.transcriptional activation.WRKY...	0.02	OrthoFinder output from all 47 species
AMTR_s00130p00044000	ATWRKY65,...	RNA biosynthesis.transcriptional activation.WRKY...	0.04	OrthoFinder output from all 47 species
AT4G01250	WRKY22, AtWRKY22	WRKY family transcription factor	0.02	OrthoFinder output from all 47 species
AT4G23550	ATWRKY29, WRKY29	WRKY family transcription factor	0.02	OrthoFinder output from all 47 species
Adi_g058782	MEE24, AtWRKY35, WRKY35	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g058783	WRKY14, AR411, ATWRKY14	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g04777	WRKY21	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aob_g08916	WRKY17, ATWRKY17	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g06206	MEE24, AtWRKY35, WRKY35	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene38365.t1	WRKY14, AR411,...	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene47384.t1	MEE24, AtWRKY35,...	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene47412.t1	MEE24, AtWRKY35,...	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Aspi01Gene71919.t2	MEE24, AtWRKY35,...	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0006.g010291	MEE24, AtWRKY35, WRKY35	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Azfi_s0028.g023846	MEE24, AtWRKY35, WRKY35	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.07G043400.1	ATWRKY11,...	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.09G022800.1	MEE24, AtWRKY35,...	WRKY-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.09G022900.1	ATWRKY69,...	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Ceric.10G040600.1	MEE24, AtWRKY35,...	WRKY-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.22G047500.1	WRKY21, Ceric.22G047500	WRKY-type transcription factor & original description:...	0.02	OrthoFinder output from all 47 species
Ceric.22G053300.1	MEE24, AtWRKY35,...	WRKY-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Ceric.33G025500.1	WRKY17,...	WRKY-type transcription factor & original description:...	0.03	OrthoFinder output from all 47 species
Dac_g16824	WRKY15	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g33186	WRKY14, AR411, ATWRKY14	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Dde_g21999	MEE24, AtWRKY35, WRKY35	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01019419001	WRKY22, AtWRKY22	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
Gb_05176	WRKY14, AR411, ATWRKY14	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
LOC_Os01g54600.1	ATWRKY69,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os02g16540.1	ATWRKY27,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
LOC_Os10g42850.1	MEE24, AtWRKY35,...	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
Len_g11934	ATWRKY11, WRKY11	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Len_g57611	MEE24, AtWRKY35, WRKY35	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Lfl_g27167	WRKY21	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
MA_10436931g0040	ATWRKY11, WRKY11	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
MA_136551g0010	ATWRKY65, WRKY65	transcription factor (WRKY)	0.03	OrthoFinder output from all 47 species
MA_88419g0010	WRKY21	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Msp_g09452	WRKY21	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Msp_g25418	MEE24, AtWRKY35, WRKY35	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g26027	ATWRKY7, WRKY7	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pir_g19985	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ppi_g31609	MEE24, AtWRKY35, WRKY35	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g33144	MEE24, AtWRKY35, WRKY35	WRKY-type transcription factor & original description: none	0.04	OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008581	ATWRKY69, WRKY69	WRKY-type transcription factor & original description: CDS=1-1491	0.05	OrthoFinder output from all 47 species
Sacu_v1.1_s0302.g027199	MEE24, AtWRKY35, WRKY35	WRKY-type transcription factor & original description:...	0.04	OrthoFinder output from all 47 species
Smo77979	MEE24, AtWRKY35, WRKY35	RNA biosynthesis.transcriptional activation.WRKY...	0.03	OrthoFinder output from all 47 species
Solyc01g095100.4.1	WRKY22,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Solyc04g078550.3.1	ATWRKY7, WRKY7,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species
Solyc08g081610.4.1	ATWRKY29,...	transcription factor (WRKY)	0.02	OrthoFinder output from all 47 species
Spa_g37838	ATWRKY65, WRKY65	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g41311	WRKY74, ATWRKY74	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g12364	MEE24, AtWRKY35, WRKY35	WRKY-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g40337	MEE24, AtWRKY35, WRKY35	WRKY-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Zm00001e014530_P002	Zm00001e014530	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Zm00001e019908_P001	ATWRKY69,...	transcription factor (WRKY)	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005509	calcium ion binding	IEP	HCCA
BP	GO:0006952	defense response	IEP	HCCA
BP	GO:0010035	response to inorganic substance	IEP	HCCA
BP	GO:0010167	response to nitrate	IEP	HCCA
BP	GO:0015698	inorganic anion transport	IEP	HCCA
BP	GO:0015706	nitrate transmembrane transport	IEP	HCCA
MF	GO:0016810	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds	IEP	HCCA
MF	GO:0016811	hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides	IEP	HCCA
BP	GO:0042221	response to chemical	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
BP	GO:0050896	response to stimulus	IEP	HCCA
BP	GO:0098661	inorganic anion transmembrane transport	IEP	HCCA
BP	GO:1901698	response to nitrogen compound	IEP	HCCA
BP	GO:1901700	response to oxygen-containing compound	IEP	HCCA
BP	GO:1902025	nitrate import	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR003657	WRKY_dom	85	142

External Links

No external refs found!

Sam_g09775

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation