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  5. Sam_g10266

Sam_g10266


Description : pectin methylesterase & original description: none


Gene families : OG0000083 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000083_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g10266

Target Alias Description ECC score Gene Family Method Actions
Als_g18741 No alias pectin methylesterase & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g24120 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene24083.t1 Aspi01Gene24083 pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene48099.t1 Aspi01Gene48099 pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene55625.t1 Aspi01Gene55625 pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene59341.t1 Aspi01Gene59341 pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene59345.t1 Aspi01Gene59345 pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene59353.t1 Aspi01Gene59353 pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene63093.t1 Aspi01Gene63093 pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0215.g058398 No alias pectin methylesterase & original description: CDS=361-1539 0.03 OrthoFinder output from all 47 species
Ceric.13G037100.1 Ceric.13G037100 not classified & original description: pacid=50635930... 0.03 OrthoFinder output from all 47 species
Ceric.13G037500.1 Ceric.13G037500 pectin methylesterase & original description:... 0.04 OrthoFinder output from all 47 species
Len_g31415 No alias pectin methylesterase & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g23584 No alias pectin methylesterase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g38524 No alias EC_3.1 hydrolase acting on ester bond & original... 0.03 OrthoFinder output from all 47 species
Sam_g16248 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g36158 No alias pectin methylesterase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0030599 pectinesterase activity IEA Interproscan
BP GO:0042545 cell wall modification IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
CC GO:0033177 proton-transporting two-sector ATPase complex, proton-transporting domain IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR000070 Pectinesterase_cat 68 361
No external refs found!