Description : component *(bS16m) of small mitoribosomal-subunit proteome & original description: none
Gene families : OG0002911 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002911_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Sam_g10315 | |
| Cluster | HCCA: Cluster_26 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Adi_g002716 | No alias | component *(bS16m) of small mitoribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g074405 | SSR16 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Azfi_s0066.g036077 | No alias | component *(bS16m) of small mitoribosomal-subunit... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.13G025200.1 | Ceric.13G025200 | component *(bS16m) of small mitoribosomal-subunit... | 0.04 | OrthoFinder output from all 47 species | |
| Cre12.g494450 | No alias | 30S ribosomal protein S16, chloroplastic OS=Staurastrum... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g05272 | SSR16 | not classified & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Len_g04546 | No alias | component *(bS16m) of small mitoribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Mp4g12130.1 | SSR16 | component mtRPS16 of small ribosomal subunit proteome | 0.07 | OrthoFinder output from all 47 species | |
| Nbi_g00253 | No alias | component *(bS16m) of small mitoribosomal-subunit... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0021.g008294 | No alias | component *(bS16m) of small mitoribosomal-subunit... | 0.05 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003735 | structural constituent of ribosome | IEA | Interproscan |
| CC | GO:0005840 | ribosome | IEA | Interproscan |
| BP | GO:0006412 | translation | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| CC | GO:0016020 | membrane | IEP | HCCA |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | HCCA |
| MF | GO:0016655 | oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor | IEP | HCCA |
| MF | GO:0016779 | nucleotidyltransferase activity | IEP | HCCA |
| MF | GO:0016859 | cis-trans isomerase activity | IEP | HCCA |
| CC | GO:0019898 | extrinsic component of membrane | IEP | HCCA |
| MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
| CC | GO:1990204 | oxidoreductase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR000307 | Ribosomal_S16 | 80 | 141 |
| No external refs found! |
