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  5. Sam_g10342

Sam_g10342


Description : chaperone *(Hsp60) & original description: none


Gene families : OG0001609 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001609_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g10342

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00241820 HSP60, HSP60-3B,... External stimuli response.temperature.Hsp... 0.02 OrthoFinder output from all 47 species
AT2G33210 HSP60-2 heat shock protein 60-2 0.07 OrthoFinder output from all 47 species
AT3G13860 HSP60-3A heat shock protein 60-3A 0.03 OrthoFinder output from all 47 species
Adi_g020511 HSP60, HSP60-3B not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g02162 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g10101 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g07324 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g22632 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01781 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g30058 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene41609.t1 HSP60, HSP60-3B,... chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0035.g025479 HSP60, HSP60-3B chaperone *(Hsp60) & original description: CDS=79-1794 0.06 OrthoFinder output from all 47 species
Cba_g03933 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G060200.1 HSP60, HSP60-3B,... chaperone *(Hsp60) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.20G020600.1 HSP60, HSP60-3B,... chaperone *(Hsp60) & original description:... 0.06 OrthoFinder output from all 47 species
Ceric.25G075100.1 HSP60, HSP60-3B,... chaperone *(Hsp60) & original description:... 0.02 OrthoFinder output from all 47 species
Cre06.g309100 HSP60, HSP60-3B External stimuli response.temperature.Hsp... 0.01 OrthoFinder output from all 47 species
GSVIVT01016859001 HSP60-3A External stimuli response.temperature.Hsp... 0.03 OrthoFinder output from all 47 species
LOC_Os05g46290.1 HSP60-3A, LOC_Os05g46290 chaperone (Hsp60) 0.03 OrthoFinder output from all 47 species
Len_g02840 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.04 OrthoFinder output from all 47 species
MA_8569886g0010 HSP60, HSP60-3B Chaperonin CPN60, mitochondrial OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Mp6g16880.1 HSP60, HSP60-3B chaperone (Hsp60) 0.02 OrthoFinder output from all 47 species
Msp_g11889 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g47850 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01176 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c4_22500V3.1 HSP60-2, Pp3c4_22500 heat shock protein 60 0.01 OrthoFinder output from all 47 species
Solyc03g121640.3.1 HSP60-3A, Solyc03g121640 chaperone (Hsp60) 0.03 OrthoFinder output from all 47 species
Solyc05g053470.3.1 HSP60, HSP60-3B,... chaperone (Hsp60) 0.03 OrthoFinder output from all 47 species
Spa_g18561 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06599 HSP60, HSP60-3B chaperone *(Hsp60) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e004641_P001 HSP60, HSP60-3B,... chaperone (Hsp60) 0.02 OrthoFinder output from all 47 species
Zm00001e012733_P002 HSP60, HSP60-3B,... chaperone (Hsp60) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
BP GO:0009719 response to endogenous stimulus IEP HCCA
BP GO:0009725 response to hormone IEP HCCA
BP GO:0010033 response to organic substance IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0019843 rRNA binding IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
BP GO:0042221 response to chemical IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR002423 Cpn60/GroEL/TCP-1 47 548
No external refs found!