Description : not classified & original description: none
Gene families : OG0001598 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001598_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Azfi_s0066.g036066 | UPF1, ATUPF1, LBA1 | not classified & original description: CDS=178-2511 | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g36240 | No alias | not classified & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Cre09.g396139 | UPF1, ATUPF1, LBA1 | Regulator of nonsense transcripts 1 homolog... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g22041 | UPF1, ATUPF1, LBA1 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Len_g20630 | UPF1, ATUPF1, LBA1 | Nonsense-Mediated mRNA Decay effector protein *(UPF1) &... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc08g007110.4.1 | UPF1, ATUPF1,... | UPF1 Nonsense-Mediated mRNA Decay effector protein | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0000166 | nucleotide binding | IEP | HCCA |
| MF | GO:0005524 | ATP binding | IEP | HCCA |
| MF | GO:0016887 | ATP hydrolysis activity | IEP | HCCA |
| MF | GO:0017076 | purine nucleotide binding | IEP | HCCA |
| MF | GO:0030554 | adenyl nucleotide binding | IEP | HCCA |
| CC | GO:0031090 | organelle membrane | IEP | HCCA |
| CC | GO:0031966 | mitochondrial membrane | IEP | HCCA |
| MF | GO:0032553 | ribonucleotide binding | IEP | HCCA |
| MF | GO:0032555 | purine ribonucleotide binding | IEP | HCCA |
| MF | GO:0032559 | adenyl ribonucleotide binding | IEP | HCCA |
| MF | GO:0035639 | purine ribonucleoside triphosphate binding | IEP | HCCA |
| MF | GO:0036094 | small molecule binding | IEP | HCCA |
| MF | GO:0043168 | anion binding | IEP | HCCA |
| MF | GO:0097159 | organic cyclic compound binding | IEP | HCCA |
| MF | GO:0097367 | carbohydrate derivative binding | IEP | HCCA |
| MF | GO:1901265 | nucleoside phosphate binding | IEP | HCCA |
| MF | GO:1901363 | heterocyclic compound binding | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR041679 | DNA2/NAM7-like_C | 3 | 184 |
| No external refs found! |
