Sam_g10497

Description : not classified & original description: none

Gene families : OG0001598 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001598_tree

Sequence : coding (download), protein (download)

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Type	Description	Actions
Neighborhood	HRR: Sam_g10497

Target	Alias	Description	ECC score	Gene Family Method
Adi_g042703	UPF1, ATUPF1, LBA1	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aev_g08220	UPF1, ATUPF1, LBA1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g17076	UPF1, ATUPF1, LBA1	Nonsense-Mediated mRNA Decay effector protein *(UPF1) &...	0.02	OrthoFinder output from all 47 species
Cba_g36240	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ehy_g19605	UPF1, ATUPF1, LBA1	Nonsense-Mediated mRNA Decay effector protein *(UPF1) &...	0.02	OrthoFinder output from all 47 species
Len_g20630	UPF1, ATUPF1, LBA1	Nonsense-Mediated mRNA Decay effector protein *(UPF1) &...	0.02	OrthoFinder output from all 47 species
Spa_g08453	UPF1, ATUPF1, LBA1	Nonsense-Mediated mRNA Decay effector protein *(UPF1) &...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004386	helicase activity	IEA	Interproscan
MF	GO:0140640	catalytic activity, acting on a nucleic acid	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005516	calmodulin binding	IEP	HCCA
MF	GO:0008289	lipid binding	IEP	HCCA
BP	GO:0015074	DNA integration	IEP	HCCA
MF	GO:0030246	carbohydrate binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR041677	DNA2/NAM7_AAA_11	370	485

External Links

No external refs found!