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  5. Sam_g10667

Sam_g10667


Description : not classified & original description: none


Gene families : OG0000352 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000352_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g10667

Target Alias Description ECC score Gene Family Method Actions
AT1G07850 No alias Protein of unknown function (DUF604) 0.02 OrthoFinder output from all 47 species
Adi_g045658 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g081779 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g03354 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g16575 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene01808.t1 Aspi01Gene01808 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene29110.t1 Aspi01Gene29110 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0022.g015970 No alias not classified & original description: CDS=592-2169 0.06 OrthoFinder output from all 47 species
Ceric.03G053300.1 Ceric.03G053300 not classified & original description: pacid=50572689... 0.02 OrthoFinder output from all 47 species
Ceric.10G084000.1 Ceric.10G084000 not classified & original description: pacid=50612025... 0.03 OrthoFinder output from all 47 species
Ehy_g13108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g45700.1 LOC_Os02g45700 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g03270.1 LOC_Os03g03270 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os10g37260.1 LOC_Os10g37260 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_3705655g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_7477879g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_89971g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_93259g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Mp6g09960.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g05801 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g37540 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g15705 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g28738 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc12g056200.2.1 Solyc12g056200 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0008104 protein localization IEP HCCA
BP GO:0015031 protein transport IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
BP GO:0033036 macromolecule localization IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0045184 establishment of protein localization IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
BP GO:0070727 cellular macromolecule localization IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR006740 DUF604 233 481
No external refs found!