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  5. Sam_g10810

Sam_g10810


Description : not classified & original description: none


Gene families : OG0000957 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000957_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g10810

Target Alias Description ECC score Gene Family Method Actions
AT2G15580 No alias RING/U-box superfamily protein 0.03 OrthoFinder output from all 47 species
Aev_g38055 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g20680 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06279 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene11703.t1 Aspi01Gene11703 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene23327.t1 Aspi01Gene23327 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g45444 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g26254 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01037874001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.02 OrthoFinder output from all 47 species
Gb_25302 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os01g62640.1 LOC_Os01g62640 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
LOC_Os11g37230.1 LOC_Os11g37230 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Lfl_g04051 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Mp7g04520.1 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Nbi_g16986 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g52517 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g002945 No alias not classified & original description: CDS=1-861 0.03 OrthoFinder output from all 47 species
Solyc01g107290.3.1 Solyc01g107290 Probable E3 ubiquitin-protein ligase RHY1A... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0061630 ubiquitin protein ligase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004779 sulfate adenylyltransferase activity IEP HCCA
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0020037 heme binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR039525 RNF126-like_zinc-ribbon 30 61
No external refs found!