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  5. Sam_g10932

Sam_g10932


Description : not classified & original description: none


Gene families : OG0000740 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000740_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g10932

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00018p00247260 iqd17,... Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00053p00180370 IQD3,... Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AT4G10640 IQD16 IQ-domain 16 0.03 OrthoFinder output from all 47 species
Adi_g058759 iqd17 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g01302 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g23783 IQD6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0034.g025364 iqd17 not classified & original description: CDS=155-1645 0.03 OrthoFinder output from all 47 species
Ceric.14G012900.1 IQD6, Ceric.14G012900 not classified & original description: pacid=50633767... 0.05 OrthoFinder output from all 47 species
Ceric.29G054200.1 iqd2, Ceric.29G054200 not classified & original description: pacid=50625263... 0.02 OrthoFinder output from all 47 species
Ceric.34G011600.1 IQD3, Ceric.34G011600 not classified & original description: pacid=50623826... 0.04 OrthoFinder output from all 47 species
Ceric.39G025000.1 IQD18, Ceric.39G025000 not classified & original description: pacid=50583633... 0.04 OrthoFinder output from all 47 species
Dac_g02287 IQD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g24360 IQD3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01025635001 IQD3 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Gb_20874 iqd2 microtubule - plasma membrane linkage regulator (IQD13) 0.03 OrthoFinder output from all 47 species
Len_g04290 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g39517 iqd17 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g36929 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp3g23600.1 IQD3 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g04298 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12855 IQD3 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g29600 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0058.g014897 IQD3 not classified & original description: CDS=874-2742 0.04 OrthoFinder output from all 47 species
Sam_g18617 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc10g084280.2.1 IQD3, Solyc10g084280 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Tin_g13660 IQD3 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e019382_P001 IQD3, Zm00001e019382 Protein IQ-DOMAIN 1 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 101 120
IPR025064 DUF4005 369 441
No external refs found!