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  5. Sam_g10981

Sam_g10981


Description : not classified & original description: none


Gene families : OG0000120 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g10981

Target Alias Description ECC score Gene Family Method Actions
Adi_g112695 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g05367 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g05983 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g49724 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g64152 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g26376 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03820 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene26270.t1 Aspi01Gene26270 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene47653.t1 Aspi01Gene47653 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g19823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G042600.1 Ceric.04G042600 not classified & original description: pacid=50631655... 0.02 OrthoFinder output from all 47 species
Dcu_g02961 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15720 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os07g39560.3 LOC_Os07g39560 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Pnu_g10776 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g25221 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g05225 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002214 No alias not classified & original description: CDS=892-2337 0.04 OrthoFinder output from all 47 species
Sam_g44185 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc07g048030.4.1 Solyc07g048030 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc09g072790.3.1 Solyc09g072790 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Solyc11g012470.2.1 Solyc11g012470 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc12g014600.2.1 Solyc12g014600 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Spa_g09961 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e010648_P001 Zm00001e010648 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0030234 enzyme regulator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0098772 molecular function regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 8 67
IPR000504 RRM_dom 111 169
No external refs found!