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  5. Sam_g11385

Sam_g11385


Description : component *(SHL/EBS) of PRC1 complex & original description: none


Gene families : OG0000671 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000671_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g11385

Target Alias Description ECC score Gene Family Method Actions
Ala_g03810 EBS component *(SHL/EBS) of PRC1 complex & original description: none 0.02 OrthoFinder output from all 47 species
Als_g02949 EBS component *(SHL/EBS) of PRC1 complex & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g21705 EBS component *(SHL/EBS) of PRC1 complex & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46679.t1 EBS, Aspi01Gene46679 component *(SHL/EBS) of PRC1 complex & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.03G027600.1 EBS, Ceric.03G027600 component *(SHL/EBS) of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Ceric.06G075800.1 EBS, Ceric.06G075800 component *(SHL/EBS) of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Ceric.39G020300.1 EBS, Ceric.39G020300 component *(SHL/EBS) of PRC1 complex & original... 0.02 OrthoFinder output from all 47 species
Dac_g10231 EBS component *(SHL/EBS) of PRC1 complex & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01030487001 EBS Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder output from all 47 species
LOC_Os08g32620.1 EBS, LOC_Os08g32620 component BAH of BAH-EMF1 Polycomb silencing complex 0.03 OrthoFinder output from all 47 species
LOC_Os09g21770.1 EBS, LOC_Os09g21770 component BAH of BAH-EMF1 Polycomb silencing complex 0.02 OrthoFinder output from all 47 species
Len_g03696 EBS component *(SHL/EBS) of PRC1 complex & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g41690 EBS component *(SHL/EBS) of PRC1 complex & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0041.g012510 EBS component *(SHL/EBS) of PRC1 complex & original... 0.03 OrthoFinder output from all 47 species
Spa_g25015 EBS component *(SHL/EBS) of PRC1 complex & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g25986 EBS component *(SHL/EBS) of PRC1 complex & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e022395_P003 EBS, Zm00001e022395 component BAH of BAH-EMF1 Polycomb silencing complex 0.03 OrthoFinder output from all 47 species
Zm00001e033007_P001 EBS, Zm00001e033007 component BAH of BAH-EMF1 Polycomb silencing complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000151 ubiquitin ligase complex IEP HCCA
CC GO:0000152 nuclear ubiquitin ligase complex IEP HCCA
CC GO:0005680 anaphase-promoting complex IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0007346 regulation of mitotic cell cycle IEP HCCA
BP GO:0010564 regulation of cell cycle process IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
BP GO:0030071 regulation of mitotic metaphase/anaphase transition IEP HCCA
CC GO:0030915 Smc5-Smc6 complex IEP HCCA
CC GO:0031461 cullin-RING ubiquitin ligase complex IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033043 regulation of organelle organization IEP HCCA
BP GO:0033044 regulation of chromosome organization IEP HCCA
BP GO:0033045 regulation of sister chromatid segregation IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
BP GO:0051128 regulation of cellular component organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0051726 regulation of cell cycle IEP HCCA
BP GO:0051983 regulation of chromosome segregation IEP HCCA
CC GO:0106068 SUMO ligase complex IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901987 regulation of cell cycle phase transition IEP HCCA
BP GO:1901990 regulation of mitotic cell cycle phase transition IEP HCCA
BP GO:1902099 regulation of metaphase/anaphase transition of cell cycle IEP HCCA
CC GO:1902494 catalytic complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR001025 BAH_dom 23 135
No external refs found!