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  5. Sam_g11660

Sam_g11660


Description : not classified & original description: none


Gene families : OG0000642 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000642_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g11660

Target Alias Description ECC score Gene Family Method Actions
Adi_g022185 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g115931 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g16560 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14819 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g22163 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11474 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19115 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g37925 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03086 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Azfi_s0130.g049026 No alias not classified & original description: CDS=251-1009 0.04 OrthoFinder output from all 47 species
Cba_g14713 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.05G062300.1 Ceric.05G062300 not classified & original description: pacid=50578128... 0.02 OrthoFinder output from all 47 species
Dac_g13809 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Dcu_g07449 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g09629 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g23747 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g04385 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g04417 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g19804 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01011624001 No alias Binding partner of ACD11 1 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01022464001 No alias Binding partner of ACD11 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os03g50560.1 LOC_Os03g50560 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
LOC_Os04g54870.1 LOC_Os04g54870 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Len_g55926 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g03642 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pnu_g30567 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g00654 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0045.g013208 No alias not classified & original description: CDS=23-751 0.03 OrthoFinder output from all 47 species
Solyc08g076530.3.1 Solyc08g076530 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Spa_g04495 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g38160 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g05834 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005469_P003 Zm00001e005469 Binding partner of ACD11 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003871 5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008172 S-methyltransferase activity IEP HCCA
BP GO:0008652 amino acid biosynthetic process IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0042085 5-methyltetrahydropteroyltri-L-glutamate-dependent methyltransferase activity IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
BP GO:0046394 carboxylic acid biosynthetic process IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 8 66
No external refs found!