1. Home
  2. Species
  3. Salvinia molesta
  4. Sequence
  5. Sam_g11715

Sam_g11715


Description : not classified & original description: none


Gene families : OG0000120 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g11715
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
Adi_g022493 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g054785 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g057131 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g058415 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g074128 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g108001 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g05289 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g47700 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13552 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08511 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19166 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g26133 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g33385 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.14G063200.1 Ceric.14G063200 not classified & original description: pacid=50633319... 0.04 OrthoFinder output from all 47 species
Ceric.19G061100.1 Ceric.19G061100 not classified & original description: pacid=50575703... 0.04 OrthoFinder output from all 47 species
Ceric.24G054300.1 Ceric.24G054300 not classified & original description: pacid=50629415... 0.03 OrthoFinder output from all 47 species
Ceric.35G060600.1 Ceric.35G060600 not classified & original description: pacid=50581737... 0.03 OrthoFinder output from all 47 species
Dcu_g33739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03669 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g07658 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g14502 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g16526 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os02g12850.1 LOC_Os02g12850 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
LOC_Os08g23120.1 LOC_Os08g23120 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g03813 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g19867 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g22115 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_36839g0020 No alias RNA-binding protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_79622g0010 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.05 OrthoFinder output from all 47 species
MpVg00970.1 No alias No annotation 0.03 OrthoFinder output from all 47 species
Nbi_g00898 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g22584 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g40736 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g09717 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g07882 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g11285 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g07867 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g20205 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011540_P001 Zm00001e011540 RNA-binding protein 1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005484 SNAP receptor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0006890 retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0030674 protein-macromolecule adaptor activity IEP HCCA
MF GO:0031625 ubiquitin protein ligase binding IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
MF GO:0044389 ubiquitin-like protein ligase binding IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0060090 molecular adaptor activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 81 148
IPR000504 RRM_dom 168 237
No external refs found!